Solea solea (common sole): 131476101
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Entry
131476101 CDS
T10853
Symbol
alyref
Name
(RefSeq) THO complex subunit 4 isoform X1
KO
K12881
THO complex subunit 4
Organism
ssoe Solea solea (common sole)
Pathway
ssoe03013
Nucleocytoplasmic transport
ssoe03015
mRNA surveillance pathway
ssoe03040
Spliceosome
ssoe05168
Herpes simplex virus 1 infection
Brite
Messenger RNA biogenesis [BR:
ssoe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131476101 (alyref)
TREX complex
131476101 (alyref)
Spliceosome [BR:
ssoe03041
]
Complex C
Other components
EJC/TREX
131476101 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131476101 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
131476101
NCBI-ProteinID:
XP_058510574
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All DBs
Position
16:complement(18476959..18479831)
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AA seq
274 aa
AA seq
DB search
MADKLDMSLDDIIKQNRQQRGGGRGGRGRGRGGSGGARGGGGAGRGGVGGGFGGRGGGSG
PMRSRQNLSRARGRPTPYSRPKQLPDKWQHDMFDNGFSGFNGTAGGGGGAGVETGGKLLV
SNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERRADAHKAMKQYNGIP
LDGRPMNIQLVTSQIDTQRRPMQGLNRGGGGMNRGRGGGFGAMQRGRGGRGASGSRGRGR
GGRGGSGGGTSKQQLSAEELDAQLDAYNARMDTS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaactggatatgtctctagacgacattattaagcagaacaggcagcaaaga
ggaggaggccgcggtggaagaggtcgaggccgcggaggctccggtggcgcccgaggagga
ggtggtgctggtcgcggtggagtcggtggcggatttggaggccgaggcggtggatccggc
cccatgaggagccgacagaacctgagccgcgctagaggcagaccaacgccttacagcagg
cctaaacagcttccagataagtggcagcatgacatgtttgacaacggcttcagcggcttc
aatggcactgctgggggtggcggaggagctggtgtggaaactggagggaagctccttgtc
tccaatctcgactttggggtctcagatgccgacattcaggaactttttgctgaatttgga
acgctgaaaaaggctgcagttcattatgaccgatctggaaggagcttgggaactgctgat
gtacactttgaaaggagggcggatgcacacaaggccatgaaacagtacaatggcatccca
cttgatgggcgaccaatgaacatacaactcgtcacatcacagatagacacacagagacgg
cctatgcaggggctaaacagaggtggtgggggcatgaacagaggtcgtgggggtggattt
ggagccatgcaaagaggtcgaggaggacgtggtgctagcggttcaagaggaagaggtcga
ggaggacgtggcgggagcggtggtggcaccagcaagcagcagctatcggcagaagaactt
gatgctcagttagatgcctacaatgctagaatggacaccagctaa
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