Solea solea (common sole): 131476157 Help Entry 131476157         CDS       T10853                                  Symbol col1a1a Name (RefSeq) collagen, type I, alpha 1a   KO K06236   collagen type I alpha Organism ssoe  Solea solea (common sole) Pathway ssoe04510   Focal adhesion ssoe04512   ECM-receptor interaction ssoe04518   Integrin signaling ssoe04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:ssoe00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     131476157 (col1a1a)    04518 Integrin signaling     131476157 (col1a1a)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     131476157 (col1a1a)   09142 Cell motility    04820 Cytoskeleton in muscle cells     131476157 (col1a1a)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:ssoe00536]     131476157 (col1a1a) Glycosaminoglycan binding proteins [BR:ssoe00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    131476157 (col1a1a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  131476157 NCBI-ProteinID:  XP_058510671 LinkDB All DBs Position 16:24250181..24268226 Genome browser AA seq 1447 aa AA seqDB search MFSFVDLRLALLLSAAVLLVRAQGEEDRESTSCTLDGQVFADRDVWKPEPCQICVCDSGT VMCDEVICEDTTDCPNPIIPHDECCPICPDDSFQDAQVEGPKGERGPKGDRGLPGPAGND GIPGQPGLPGPPGPPGPPGLGGNFSPQMSGGYHDKSSAMPVPGPMGPMGPRGPPGPSGSS GPQGFTGPPGEPGEAGASGPMGPRGAAGPPGKNGEDGESGKPGRGGERGPSGPQGARGFP GTPGLPGIKGHRGFSGLDGAKGESGPAGPKGESGAPGENGTPGAMGPRGLPGERGRTGAN GAAGARGNDGAAGAAGPPGPTGPAGSPGFPGGPGSKGDAGPQGARGGEGPSGARGEPGNP GPAGPAGPSGNPGTDGAPGAKGNNGAAGVAGAPGFPGPRGPSGPQGAGGAPGPKGNTGEV GAPGAKGEAGAKGEAGAPGVQGPPGPSGEEGKRGARGEPGAAGGRGAPGERGGPGGRGFP GSDGSAGPRGANGERGAPGLVGPKGATGETGRTGEPGLPGAKGMTGSPGSPGPDGKLGPS GAPGQDGRPGPPGSVGARGQPGVMGFPGPKGAAGEPGKSGERGLMGPTGPGGAPGKDGDV GAQGPSGPAGPAGERGEQGPAGGPGFQGLPGPQGAAGESGKPGEQGVPGEAGAPGPAGSR GDRGFPGERGANGPVGPAGARGSPGSAGNEGAKGDAGAPGAPGAQGPPGLQGMPGERGAA GLPGLRGDRGDQGLKGGDGAPGKDGPRGLTGPIGLPGPAGSPGDKGEPGAPGIVGPAGAR GGPGERGEAGPPGPAGFAGPPGNEGQPGAKGEAGDNGAKGDAGPPGAAGPTGAAGPAGPL GNTGAKGARGPAGPPGATGFPGAAGRVGAPGPSGNAGPPGPAGGAGKEGPKGNRGETGPA GRSGELGPAGPPGSPGEKGSPGAEGSSGSSGIPGPQGIAGQRGIVGLPGQRGERGFPGLP GPSGEVGKQGHGGPGGERGPPGPMGPSGLAGPPGEPGREGAPGNEGSAGRDGPAGPKGDR GESGPSGAPGAPGPSGAPGPVGPAGKTGDRGDSGPAGPAGPAGPAGPRGPAGAHGLRGDK GESGEAGERGMKGHRGFTGMQGPPGPSGPSGEQGPAGTAGATGPRGPSGSAGSAGKDGMS GLPGPTGPPGPRGRSGEMGPAGPPGPPGPPGPPGAPGGGFDLGFIAQPQEKAPDPFRMYR ADDANVLRDRDLEVDTTLKSLSQQIEQIRSPDGTRKNPARTCRDLKMCHPDWKSGEYWID PDQGCTQDAIKVYCNMDTGETCVSPVQSEVAKKNWYVSKNIKEKKHVWFGEAMTDGFQFE YGSEGSLPEDVNIQMTFLRLMSTEASQNITYHCKNSVAYMDASAGNLKKAMLLQGSNEIE IRAEGNSRFTYSVLEDGCTSHTGTWGKTVIDYKTTKTSRLPIIDIAPMDVGAPDQEFGLE VGPVCFL NT seq 4344 nt NT seq  +upstreamnt  +downstreamnt atgttcagctttgtggatttgcggctagcgctgctgctcagcgcagcagtgctcctggtg agagcccagggcgaggaagaccgtgagagtacgagttgcaccttggacggccaggtgttt gcggaccgggatgtgtggaagccagagccatgccagatctgcgtgtgcgacagcggcaca gtgatgtgcgatgaggtcatctgcgaggacacaaccgactgccccaaccctatcatcccc cacgacgagtgctgccccatctgccccgatgacagcttccaggacgctcaagttgaggga cccaagggagagcgtggacccaagggagatagaggtcttcctggtcccgctggtaacgat ggtatccctggacagcccggacttcctggacctcccggcccccctggaccccccggcctt ggtggaaacttctctcctcagatgtccggtggctaccatgacaaatcttctgccatgcct gtgcccggacccatgggcccaatgggaccccgtggacctcctggaccttccggttcaagt ggacctcagggattcactggcccccctggtgagcctggagaggctggagcttctggtccc atgggtccccgtggcgccgctggcccccctggcaagaacggagaggatggtgagtctggc aagcccggtcgtggtggtgagcgtggaccttctggcccacagggagcccgtggtttcccc ggaacccccggtctgcccggaatcaagggacacagaggattcagtggtctggatggtgct aagggagagtctggccctgctggacccaagggagagtctggtgctcctggtgagaatggt acccctggtgctatgggacctcgtggtttgcctggtgagagaggccgcactggtgctaat ggagctgctggagcccgtggtaacgatggtgccgctggtgctgctggacctcctggaccc actggccctgctggatcccctggattccctggtggccctggatccaagggtgatgccgga cctcagggtgctcgtggaggcgagggacccagtggagcccgtggtgagcctggcaaccct ggacctgctggccccgctggaccttctggaaaccccggaactgatggagcccctggtgct aagggaaacaatggtgctgctggagttgccggagctcccggtttccccggacctcgtgga ccctcaggacctcagggtgctggtggtgcccccggacccaagggtaacactggagaagtt ggtgccccaggagccaagggagaggccggtgccaagggagaggctggtgccccaggagtt caaggaccccccggaccctctggtgaggagggcaagagaggagcaagaggagagcctggt gctgcaggaggccgtggagctcccggagagcgtggtggtcctggtggtcgtggtttccct ggctctgatggttctgctggacccagaggtgccaacggtgagcgcggtgcccccggtctt gttggacctaaaggtgctactggtgagactggacgcactggtgagcctggtctgcccgga gccaagggtatgactggaagccctggcagccctggacctgatggcaaactgggaccttct ggagcccctggacaagatggccgccctggaccccctggctctgttggagctagaggccag cctggagttatgggattccccggacccaagggagctgctggtgagcccggaaagtctggc gagagaggattgatgggacctactggacctggtggtgcccctggaaaggacggcgatgtt ggtgcccagggaccctctggacccgctggccctgctggtgagagaggagagcaaggacct gctggaggtcccggattccagggtcttcccggaccccagggtgctgctggtgagagtgga aagcccggagagcagggtgtgcctggtgaggccggtgcccctggacccgctggatctaga ggagacagaggattccccggtgagcgcggtgctaatggcccagttggacctgctggtgcc cgtggatcccctggatctgctggaaatgagggtgctaagggtgatgctggtgctcctggt gctcccggagctcagggtcctcctggcctgcagggtatgcctggtgagcgcggtgccgct ggtcttccaggactgaggggagacagaggtgaccaaggacttaagggtggtgatggtgct cctggtaaggatggtcctcgtggcttgactggacccattggacttcccggacctgctgga tctcccggagataagggagagcctggtgctcctggtattgttggacctgctggagcccgt ggaggccctggtgagcgtggagaggctggaccacccggacctgctggattcgctggaccc cctggtaatgagggtcaacctggtgctaagggagaggctggagataatggtgctaaggga gatgctggtccccctggcgctgctggacccactggtgccgctggacctgcgggtcccctt ggaaacactggtgccaagggagcccgcggacctgctggacctcctggtgctactggcttc cctggtgctgctggccgtgttggagcccctggcccatctggcaacgctggacctcctgga cccgctggaggcgctggcaaagagggacccaaaggaaaccgtggtgaaactggacctgct ggtcgctctggagagcttggacctgctggacccccaggatctcctggcgagaagggtagc cccggtgctgagggttcttctggtagcagtggtatccctggacctcagggtattgctgga cagcgtggtattgttggtctgcccggacagaggggagagagaggtttccctggtctgcct ggaccttccggagaggttggaaagcagggacatggaggccccggtggtgagcgtggaccc cctggacccatgggaccctctggactggctggaccccctggtgagcctggacgtgaggga gcccccggaaacgagggatcagctggtcgcgatggacctgccggacccaagggagaccgt ggtgagtctggcccctctggagctcctggtgcccctggaccctctggtgcccctggacct gttggacccgctggcaagacaggcgaccgtggagattctggacctgctggccccgctggc cctgctggtcctgctggacctcgtggccctgctggagctcatggactccgtggagacaag ggagagtctggagaggctggagagagaggcatgaagggacacagaggattcactggcatg cagggacctcctggaccttctggacccagtggagagcagggacctgctggtactgccgga gctactggacctagaggcccatctggatctgctggttctgctggtaaggatggtatgtct ggcctgcctggacctactggaccccccggacctcgtggacgctctggagagatgggaccc gctggtcctcctggacctcctggaccacctggacctcccggtgcccctggtggtggattc gaccttggcttcattgcccagccccaggagaaagcacccgatcccttccgcatgtaccgc gctgatgatgccaacgttctccgtgatcgtgatctggaggtcgacacaaccctgaagagc ctcagccagcagatcgagcagatccgcagccctgacggcacccgtaaaaacccagccaga acctgccgtgacctgaagatgtgccaccctgactggaagagcggagagtactggattgac cccgaccagggctgcactcaggatgccatcaaggtctactgtaacatggacaccggagag acctgcgtatctccagttcagagcgaggttgccaagaagaactggtatgtcagcaagaac atcaaggagaagaagcacgtctggttcggagaggctatgaccgacggcttccagttcgag tatggcagcgaaggctctctgcccgaggatgtcaacatccagatgaccttcctgcgtctc atgtccactgaggcatcccagaacatcacgtaccactgcaagaacagcgtcgcctacatg gacgcttccgctggcaacctcaagaaggccatgctcctccagggctccaacgagatcgag atcagagccgagggcaacagccgcttcacctacagtgtcctggaggatggatgcacgtca cacaccggtacatggggcaagacagtcatcgactacaagacaacgaaaacatctcgcctg cccatcattgatattgctcctatggacgttggtgctccagaccaagagtttgggcttgaa gttggacctgtctgtttcttgtaa

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