Saccharolobus solfataricus SARC-C: SULC_1296
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Entry
SULC_1296 CDS
T03912
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
ssof
Saccharolobus solfataricus SARC-C
Brite
KEGG Orthology (KO) [BR:
ssof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssof03016
]
SULC_1296
Enzymes [BR:
ssof01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
SULC_1296
Transfer RNA biogenesis [BR:
ssof03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
SULC_1296
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Sen15
SMMA_C
COG2_N
rpo132
TraI_hel_assoc_N
Motif
Other DBs
NCBI-ProteinID:
AKA76293
UniProt:
A0A0E3K0G9
LinkDB
All DBs
Position
complement(1223809..1224231)
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AA seq
140 aa
AA seq
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MKTITFMGNILIFDNVTIMSEKSETTLDKIYTALNSSKQLPSEIIYLVNWDKVDVFVDLK
QRGRVTIDGIDEHSLIIKDKENGRYTAMVLIVDENEKVSFKKILDKLHQSKSMNLELYLS
IVDKYGDVTYYTLSEIKMSK
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaataacttttatggggaatatacttatttttgataatgtgactataatgtct
gagaaaagtgaaactactttagacaagatatacacagccttaaactcatctaaacagtta
cctagtgagataatttatcttgtaaattgggataaagttgatgtcttcgttgacttaaaa
cagcgaggaagggttacgattgatggtatagatgagcactctcttataataaaggacaag
gaaaatggaagatatactgctatggttttgatagtagacgaaaatgaaaaggtaagtttt
aagaaaatattagataaactacatcagtcaaaatcaatgaatttagaactttatctttca
attgtagataaatatggagatgtaacgtattatactctatctgagataaaaatgtcaaag
tga
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