Saccharolobus solfataricus SARC-C: SULC_1575
Help
Entry
SULC_1575 CDS
T03912
Name
(GenBank) DEAD/DEAH box helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ssof
Saccharolobus solfataricus SARC-C
Pathway
ssof03022
Basal transcription factors
ssof03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ssof00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SULC_1575
09124 Replication and repair
03420 Nucleotide excision repair
SULC_1575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssof03021
]
SULC_1575
03036 Chromosome and associated proteins [BR:
ssof03036
]
SULC_1575
03400 DNA repair and recombination proteins [BR:
ssof03400
]
SULC_1575
Enzymes [BR:
ssof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SULC_1575
Transcription machinery [BR:
ssof03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SULC_1575
Chromosome and associated proteins [BR:
ssof03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SULC_1575
DNA repair and recombination proteins [BR:
ssof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SULC_1575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPD_arch
Helicase_C_2
DEAD_2
ResIII
DEAD
nSTAND3
TsaE
DUF5886
Motif
Other DBs
NCBI-ProteinID:
AKA76534
UniProt:
A0A0E3MCU1
LinkDB
All DBs
Position
1461200..1462813
Genome browser
AA seq
537 aa
AA seq
DB search
MEITLREWQKQKFDEALNALKTKKTLLLNVTTGAGKTLFTLMLGKALRKKVLFLTRTHSE
FEAVRREAERLGLKVAYLFGKNSVCLYATDDVKPEDIECRECSLRDKVKDLSGLRPSQIL
QLSKDASDFCPYHSLRALISKADVIVASYMYFFNPFLRRKIICGSPDCVKPEELLVIVDE
AHNLISADEWFSKKIGKKSVSNALKEIEVVESNTNNDLTDAKNFLGELSRFLENITDEGG
CKELPLYPKPSAEALLQIHRASLSYLNMIKGPIKRSYLRSIYDFFNTEGEMFNCNGRLII
VPLNPLEMIKSSFNFADMRVLMSGTLPNLGLEAHKIDVEVRLGRSEHYYCNSVNSRVKYR
RANAEKYAEIIKKVYNDSSSSVLVFFPSYDFKGEVKKYLNGLPTLEESKRVTHEEILELM
KGGKYAVLLVMRAKESEGVEFRDEANKNLFSDMILAGLPYPDISDALVRRRIRKLSEGTK
RSEEEVAHELTLITIKQTIGRAFRDPNDYVKIYLCDSRYKEYFPNLGLKEKEIKLFV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggaaataactttgagggaatggcagaagcagaaattcgatgaggcattaaacgcatta
aagaccaaaaagacgctattgcttaacgtgactactggagcgggaaagacgttatttacg
ctcatgctagggaaagccttacgtaaaaaagtattattcctcacaaggacacacagcgaa
tttgaagctgttaggagagaggctgaaaggttagggcttaaagtggcctacctcttcggc
aagaactcggtatgcctttatgctactgacgatgttaaacccgaagacatagagtgcagg
gaatgttcattgagggacaaagtgaaggacttgagcggattaaggccatctcaaatactc
cagttaagtaaagacgcttcagatttctgcccctaccactccttaagggctttaataagt
aaggctgacgtaatagtagcttcctacatgtacttcttcaacccctttctgaggaggaag
ataatatgcggttccccggattgcgttaagcccgaggagcttttagtgattgtggatgaa
gctcataacctaatttccgctgacgagtggttctctaaaaagataggtaagaagagcgtg
agtaacgctttaaaggaaattgaggtggtagaaagtaatactaacaacgatttaacagat
gctaagaatttcctcggagaactgagtaggtttttggagaacataaccgatgagggaggc
tgtaaagaattaccattatatcctaaaccttcagcagaagccttactgcagatacacagg
gcttccttatcctatcttaacatgataaagggacctattaagaggtcatatttgaggtcc
atatacgatttcttcaatacggaaggagagatgttcaactgtaacgggaggcttattata
gtccctttgaaccccttggaaatgataaagagttctttcaactttgcggatatgagggtg
ttgatgagcggtacattgcccaacctgggtttagaagcgcataagatagacgttgaagtt
aggttaggtaggtctgaacactattactgtaattccgttaattccagagttaagtatagg
agggctaacgccgagaagtatgcggaaataataaaaaaggtgtataatgactcctcttcc
agtgtcttagttttctttccaagctatgattttaagggtgaggtaaagaaataccttaac
ggtttgcctacgttagaggagagtaagagggtaacccatgaggaaatcttagagttaatg
aagggtgggaaatacgcagtacttttggttatgagggcgaaagaaagtgaaggtgttgag
tttagagatgaggctaataagaacttatttagcgatatgatactagctggattgccttat
ccagatattagcgacgctttagttaggaggaggattaggaaactttctgaaggtactaag
aggagtgaggaggaagtagctcacgaacttacgttaattaccataaaacagacaataggt
agagcgtttcgtgaccctaatgactacgttaagatatatttgtgtgattcaaggtataag
gagtactttccgaatttaggattgaaggaaaaagagattaagctttttgtttaa
DBGET
integrated database retrieval system
