Streptomyces malaysiensis HNM0141: I1A49_06050
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Entry
I1A49_06050 CDS
T07406
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssoi
Streptomyces malaysiensis HNM0141
Pathway
ssoi03030
DNA replication
ssoi03430
Mismatch repair
ssoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I1A49_06050 (dnaE)
03430 Mismatch repair
I1A49_06050 (dnaE)
03440 Homologous recombination
I1A49_06050 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoi03032
]
I1A49_06050 (dnaE)
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_06050 (dnaE)
Enzymes [BR:
ssoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I1A49_06050 (dnaE)
DNA replication proteins [BR:
ssoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I1A49_06050 (dnaE)
DNA repair and recombination proteins [BR:
ssoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I1A49_06050 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
Motif
Other DBs
NCBI-ProteinID:
QPI54558
UniProt:
A0ABX6VZ23
LinkDB
All DBs
Position
1588920..1592450
Genome browser
AA seq
1176 aa
AA seq
DB search
MAQPFTHLHVHTQYSLLDGAARLKDLFGACREMGMSHIAMTDHGNLHGAYDFFQQATASG
VTPIIGIEAYVAPESRRTKRKIQWGQPHQKRDDVSGSGGYTHKTIWAADNTGLHHLFQLS
SDAYAQGWLQKWPRMDKEVIAEHAEGLIASTGCPSGELQTRLRLGQFDEALKAASEYQDI
FGKDRYFLELMDHGIEIERRVRDGLLDIGGKLGIPPLVTNDSHYTYADEATAHDALLCIQ
TGKNLSDLDRFRFDGTGYYLKSAEEMYAIDSSDAWQEGCRNTLLVAEQIDTTAMFDKRDL
MPRFDVPEGHTEVTWFREEVRRGMARRYPSGVPEDRQKLAEYEMDVIIQMGFPGYFLVVA
DFIMWAKQQGIAVGPGRGSAAGSIVSYAMGITDLDPVDHGLIFERFLNPERVSMPDVDID
FDERRRVEVIRYVTEKYGSDKVAMIGTYGTIKAKNAIKDSARVLGYPYAMGDRITKAMPA
DVGGKGIPLSGITDEKHPRYSEAGEVRAMYENEPDARKVIDTAKGVEGLVRQMGVHAAGV
IMSSEPIVDHVPVWVRHTDGVTITQWDYPTCESLGLLKMDFLGLRNLTIMDDAVTMVRAD
KGIDLKLLDLPLDDRKTFDMLSGGHTLGVFQFDGSAMRSLLRLMKPNQFEDITAVTALYR
PGPMGMNSHINYALRKNGQQEITPIHPELEEPLRDVLDITYGLVVYQEQVQKAAQALAGY
SLGQADLLRRAMGKKKQEVLDKEFIPFRDGCRERGYSDEAVQAVWDVLVPFAGYAYNKAH
AAAYALVSYWTAYLKANHPAEYMAALLTSVKDDKDKSAVYLNECRRMGIKVLPPDVNESV
HHFAAQGDDVILFGLEAVRNVGAHVVEAVVHARKVRGRFTSFPDYLDKIEITACNKRTTE
SLIKAGAFDPMGHTRKGLTAHYEALIDNVVAVKRKEAEGQFDLFGGMSGDGGGGDGPGFG
LDVEFSSEEWDKPYLLAQEREMLGLYVSDHPLLGLEQLLAGRADAAVAQLTGGDFPDGAV
VTVGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMVFPATYQLVSGQLVEDTVVFVKGR
LDRREDVPRLVAMELAVPDLSARHAPLCLEMLEARVTPRSVQQLKEILQAHPGPTEVHLR
VRGRARTTVYRLGHRVGIRPEFWADLKAAVAVTRVG
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtggcacagcctttcacccatctgcatgtgcacacgcagtactcgctcctggacggcgcg
gctcggctgaaggatctcttcggcgcctgccgggagatgggcatgtcgcacatcgccatg
accgaccacggcaacctccatggcgcgtatgacttcttccagcaggccacggcctcgggt
gtaacaccgatcatcgggatcgaggcgtatgtcgcaccggagtcacggcgcaccaagcgc
aagatccagtgggggcagccccatcagaagcgcgacgatgtctccggttcgggcggctac
acccacaagacgatctgggcggcggacaacaccgggctgcaccatctgttccaactgtcg
tcggacgcgtatgcccagggctggctccagaagtggccacggatggacaaggaggtcatc
gccgagcatgccgaggggctgatcgcctcgaccggctgcccatccggtgagctacagacc
cggctgcggctgggccagttcgacgaggcgctgaaggcggcctccgagtaccaggacatc
ttcggcaaggaccggtacttcctggagctgatggaccatggcatcgagatcgagcgccgg
gtccgcgacgggctgctggacatcggcgggaagctgggcatcccgccgctggtgacgaac
gactcgcactacacctacgcggacgaggccaccgcacacgatgcgctgctgtgcatccag
accggcaagaacctctcggatctggaccgcttccgcttcgacggcaccggttactacctg
aagtccgccgaggagatgtacgccatcgactcctcggacgcctggcaggagggctgccgc
aacacgctcctggtcgccgagcagatcgacaccaccgctatgttcgacaagcgcgacctg
atgccgcgcttcgacgtccccgagggccataccgaggtcacctggttccgcgaggaggtc
cggcgcggaatggcccggcgttatccgagtggcgtaccggaggaccggcagaagctggcc
gagtacgagatggacgtcatcatccagatggggttcccgggctacttcctcgtggtcgcc
gacttcatcatgtgggccaagcagcagggcatcgccgtcgggccgggccgtggttcggcg
gccggttcgatcgtctcgtacgccatgggcatcaccgacctggacccggtggaccacggg
ctgatcttcgagcggttcctcaaccccgagcgcgtgtccatgccggacgtggacatcgac
ttcgacgagcgtcggcgggtcgaggtgatccgctatgtgacggagaagtacggctccgac
aaggtcgccatgatcggcacctacggcaccatcaaggccaagaacgccatcaaggactcg
gcccgggtgctcggctatccgtacgcgatgggcgaccgcatcaccaaggccatgcccgcc
gacgtcggtggcaagggcattccgctgtccggtatcaccgatgagaagcacccccgctac
agcgaggcgggcgaggtgcgggcgatgtacgagaacgagccggatgcgcggaaggtcatc
gacaccgccaagggtgtcgagggcctggtgcggcagatgggtgtgcacgccgccggtgtg
atcatgtcgagcgagccgatcgtggaccatgtcccggtctgggtgcggcacaccgacggg
gtcacgatcacacagtgggactaccccacctgtgagtcgctcggcctgctgaagatggac
ttcctgggcctgcgcaacctcaccatcatggacgacgccgtcacgatggtgcgcgccgac
aagggcatcgacctcaagctgctggatctgccgctggacgaccgcaagaccttcgacatg
ctcagcggtggccacaccctcggtgtgttccagttcgacggcagcgcgatgcgctcactt
ctccggctgatgaaacccaaccagttcgaggacatcaccgcggtcaccgcgctgtaccgg
cccggcccgatgggcatgaactcgcatatcaactacgccctgcggaagaacggccagcag
gagatcaccccgatccacccggagcttgaggagccgctcagggacgtcctcgacatcacc
tacggcctggtcgtctaccaggagcaggtccagaaggccgcccaggcgctcgcgggctat
tcactcggccaggccgacctgctgcgccgggccatgggcaagaagaagcaggaggtcctg
gacaaggagttcatcccgttccgcgacggctgccgggagcgcggctactccgacgaggcc
gtccaggcggtctgggacgtgctggtgcccttcgcgggctacgcctacaacaaggcgcac
gccgccgcctacgcgctcgtctcgtactggaccgcctatctcaaggccaaccatccggcg
gagtacatggcggcgctgctcacctccgtcaaggacgacaaggacaagtccgccgtctac
ctcaacgagtgccgccgcatgggcatcaaggtgctgccgccggatgtgaacgagtcggtg
caccacttcgccgcccagggcgacgatgtgatcctcttcggtctggaagccgttcgcaac
gtcggggcccatgtcgtcgaggcggtcgtccacgcccgcaaggtcagggggaggttcacc
tcgttccccgactacctggacaagatcgagatcaccgcgtgcaacaagcgcaccaccgaa
tcgctgatcaaggcgggcgcgttcgacccgatgggccacacccgcaaggggctgacggcg
cactacgaggcgctgatcgacaatgtggtcgcggtcaagcgcaaggaggccgaggggcag
ttcgacctcttcggcggtatgagcggtgacggcgggggtggcgacgggccgggcttcggc
ctcgatgtcgagttctcctccgaggagtgggacaagccgtatctgctggcccaggagcgg
gagatgctgggactgtacgtgtccgaccacccgctcctcggtctggagcagctgctggcc
ggcagggcggacgccgccgtagcacagctcaccggcggtgacttcccggacggcgcggtc
gtcacggtcggcggcatcatctccggcctccagcgcaagatgaccaaacagggcaacgcc
tgggccatcgccaccgtggaggacctcgccggatccatcgagtgcatggtcttccccgcc
acctaccagctggtgtcgggccaactcgtcgaggacacggtggtgttcgtcaagggccgc
ctcgacagacgcgaggacgtgccacggctggtggcgatggagctggcggtgcccgacctg
agcgcccgccatgccccgctgtgtctggagatgctcgaagcgcgggtgaccccgcgctcc
gtgcaacagctcaaagagatcctccaggcccacccgggaccgaccgaagtacatctgcgg
gtgcgcggccgggccaggaccaccgtctaccggctgggccaccgcgtcggcatccggccc
gagttctgggcggatctcaaggcggcggtggcggtcacccgggtcggatga
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