Streptomyces malaysiensis HNM0141: I1A49_07905
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Entry
I1A49_07905 CDS
T07406
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ssoi
Streptomyces malaysiensis HNM0141
Pathway
ssoi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I1A49_07905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_07905
Enzymes [BR:
ssoi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
I1A49_07905
DNA repair and recombination proteins [BR:
ssoi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I1A49_07905
Prokaryotic type
I1A49_07905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QPI54870
LinkDB
All DBs
Position
2101510..2102187
Genome browser
AA seq
225 aa
AA seq
DB search
MAARPLNEIVEAGWAKALEPVEKRVAAMGDFLRAEIAAGRTYLPAGPNVLRAFQQPFDEV
KVLIVGQDPYPTPGHAVGLSFSVAPEVRPLPGSLENIYRELHTDLGLPRPSNGDLTPWTR
QGVLLLNKALTTAPRRPAAHRGKGWEEVTEQAIRALAERARPLVAILWGRDARNVRPLLG
SLPAIESAHPSPMSADRGFFGSRPFSRANDMLVQQGAQPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcacgacccttgaatgaaattgtggaagcgggctgggccaaggcacttgagccc
gtcgagaaacgcgtcgcggcgatgggtgacttcctgcgggccgagatcgcggcaggccgc
acctatctgcccgccgggccgaatgtgctgcgcgccttccagcagcccttcgacgaggtg
aaggtgctgatcgtgggtcaggacccgtatccgacgcccggacacgcggtggggctcagc
ttctcggtggcgcccgaggtccggccgctgccgggcagtctggagaacatctaccgcgag
ctccacaccgacctcggtctgccgcgcccgtccaacggcgatctgacgccctggacccgg
cagggcgtcctgctgctcaacaaggcgctcaccacggccccgcgccgcccggccgcccac
cgcggcaagggctgggaggaggtcaccgagcaggccatccgggcgctggccgagcgcgcc
cgcccgctggtggccattctgtggggccgcgacgcccgtaacgtgcggccgctgctgggc
agcctcccggccatcgaatccgcgcatccctcccccatgtccgcggaccgcgggttcttc
ggctcccgtccgttcagccgcgccaacgacatgctcgtacagcagggagcgcaacccgtg
gactggcgccttccctga
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