Streptomyces malaysiensis HNM0141: I1A49_12095
Help
Entry
I1A49_12095 CDS
T07406
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ssoi
Streptomyces malaysiensis HNM0141
Pathway
ssoi03030
DNA replication
ssoi03430
Mismatch repair
ssoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I1A49_12095
03430 Mismatch repair
I1A49_12095
03440 Homologous recombination
I1A49_12095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoi03032
]
I1A49_12095
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_12095
Enzymes [BR:
ssoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I1A49_12095
DNA replication proteins [BR:
ssoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I1A49_12095
DNA repair and recombination proteins [BR:
ssoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I1A49_12095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
RNase_H_2
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
QPI55561
UniProt:
A0ABX6W3J8
LinkDB
All DBs
Position
3125235..3126221
Genome browser
AA seq
328 aa
AA seq
DB search
MLEDPTATAPHPVPPSSWPATYPQGYAVVDVETTGLARDDRIVSAAVYQLDARGTVQDHW
YTLVDPQRDPGPVWIHGLTEEVLAGAPRFAEIAGELSERLADRVLVAHNAAFDWSMLARE
YARTRTAAPVRQRLCTIALSKELGLPLPNHKLETLAAHYGVVQRRAHHALDDARVLAETF
RPSLHRAAETGLRLPLLACQPLTEWSEGPAIGRQRSYRQSWRPSRKLPACPYPNPGRYEP
GGQLVQGMRVAFSGDTSVDRELLEDRTIEAGLHVASSVSRLTSVLVTNDPESPTSKTTKA
RSFGTPIIDEAAFMQLLLDVTPAPPTNR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccccacggcaaccgcaccgcaccccgtaccgccgtcctcctggccggcc
acctatccgcaggggtacgcggtcgtcgacgtggagaccaccggcctcgcccgcgacgac
cggatcgtctccgcggcggtctatcagctcgacgcccggggcacggtgcaggaccactgg
tacaccctggtcgatccgcagcgcgatccgggcccggtgtggatccacggcctcaccgag
gaggtgctggcgggcgccccgcgcttcgccgagatcgccggggagctctccgagcggctg
gccgaccgcgtcctggtcgcgcacaacgccgccttcgactggtcgatgctcgcccgcgag
tacgcccgcaccaggaccgccgcgccggtgcggcagcggctgtgcaccatcgccctctcc
aaggagctgggcctgccgctgcccaaccacaagctggagaccctcgccgcgcactacgga
gtggtccagcggcgcgcccaccacgccctggacgacgcccgagtgctcgccgagaccttc
cggcccagcctccaccgggccgccgagaccgggctgcgcctgccgctgctggcctgccag
ccgctcaccgagtggtccgaaggcccggcgatcggccgccagcggtcgtaccggcagagc
tggcgccccagccgcaagctccccgcctgcccctaccccaaccccgggcgctacgagccg
ggcgggcagctggtccagggcatgcgggtggcgttctccggggacacctccgtcgaccgc
gagctgctggaggaccggacgatcgaggccgggctgcatgtggcctccagcgtctcccgg
ctcaccagcgtgctggtcaccaacgaccccgagtcgcccacgtccaagaccaccaaggcc
cgctccttcggcacgcccatcatcgacgaggccgccttcatgcagctcctcctggacgtc
acccccgcgccgccgacaaacaggtga
DBGET
integrated database retrieval system