Streptomyces malaysiensis HNM0141: I1A49_13135
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Entry
I1A49_13135 CDS
T07406
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssoi
Streptomyces malaysiensis HNM0141
Pathway
ssoi03030
DNA replication
ssoi03430
Mismatch repair
ssoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I1A49_13135 (dnaE)
03430 Mismatch repair
I1A49_13135 (dnaE)
03440 Homologous recombination
I1A49_13135 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoi03032
]
I1A49_13135 (dnaE)
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_13135 (dnaE)
Enzymes [BR:
ssoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I1A49_13135 (dnaE)
DNA replication proteins [BR:
ssoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I1A49_13135 (dnaE)
DNA repair and recombination proteins [BR:
ssoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I1A49_13135 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
OB_MCM10
Motif
Other DBs
NCBI-ProteinID:
QPI55743
UniProt:
A0ABX6W2L5
LinkDB
All DBs
Position
complement(3360018..3363563)
Genome browser
AA seq
1181 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFNACNEMGMTHIAMTDHGNLHGAYDFYQQATGA
GITPIIGIEAYVAPESRRYKRRVQWGQPHQKRDDVSGSGGYTHKTIWASNKTGLHNLFRL
SSDAYMEGYFVKWPRMDKETIAQWSEGLIASTGCPSGELQTRLRLGQFDEALKAASEYQD
IFGKDRYFLELMDHGIEIERRVRDGLLEIGKKLDIPPLVTNDSHYTYARESEAHDALLCV
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAIDSSDAWQEGCRNTLLVAEQIDNNGWFEKRD
LMPRFDVPEGYTEVTWFQEEVKKGMARRFPGGVPEDRQSLAEYEMDVIIQMGFPGYFLVV
ADFIMWAKNNGIAVGPGRGSAAGSIVSYAMGITDLDPVEHGLIFERFLNPERVSMPDVDI
DFDERRRGEVIRYVTEKYGHDKVAQIGTYGTIKAKNAIKDSARVLGYPYAMGDRITKAMP
ADVLGKGIPLSGITDEKHPRYSEAGEVRGMYENEPDVKKVIDTARGIEGLVRQMGVHAAG
VIMSSETVTDHVPVFSPKNDGQVVTQWDYPTCESLGLLKMDFLGLRNLTIMDDAVKMVRA
NKGIDLKMLDLSLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRMMKPDNFEDISAVSALY
RPGPMGMNSHINYALRKNGQQEITPIHPELEEPLKEVLGITYGLIVYQEQVQKAAQVLAG
YSLGQADLLRRAMGKKKPEVLEKEFVNFQKGAREKGYSDEAIQAVWDVLVPFAGYAFNKA
HSSAYGLVTYWTAYLKANYPAEYMAALLTSVRDDKDKSAVYLNECRRMGIKVLPPNVNES
EANFTAQGDDVILFGLTAVRNVGQNVVEAIIRGRKAKGKYGSFPDYLDKVEAVVCNKRTT
ESLIKAGAFDEMGHTRKGLTAHYEALIDNVVAVKRKEAEGQFDLFGGMGGDGGDGDGPGF
GLDVEFSDVEWEKTYLLAQEREMLGLYVSDHPLFGIEHVLNEKADAAISALTGGEHADGA
IVTIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLIEDVVVFVKG
RLDKREDVPRLVAMELMVPDLSEAGADAPVTITIPTVKVTPPLVEKLSEVLTHHRGSTEV
RIKLQGARKTTVLRLDRHRVTADPALFGDLKVLLGASCLAG
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagccgcccttcacgcacctgcatgtccatacccagtactcgctgctggacggt
gcggcgcggctcaaggacatgttcaacgcctgcaatgagatgggcatgacccatatcgcc
atgaccgaccatggcaacctccacggggcgtacgacttctaccagcaggcgacgggcgcc
gggatcaccccgatcatcgggatcgaggcgtatgtggcgcccgagtcgcggcgctacaag
cggcgtgtccagtggggccagccgcaccagaagcgcgatgacgtctccggttccggtggt
tacacccacaagaccatctgggcgtcgaacaagaccggtctgcacaacctcttccggctc
tcctcggacgcctatatggagggctatttcgtcaagtggccgcggatggacaaggagacc
atcgcccagtggtccgagggcctgatcgcctccaccggctgcccctcgggcgagttgcag
acccggctgcggctgggccagttcgacgaggccctcaaggccgcctccgagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccatggcatcgagatcgagcgc
cgggtccgggacgggctgctggagatcggcaagaagctggacatcccgccgctggtgacc
aacgactcgcactacacctacgcccgcgagtccgaggcgcatgacgcgctgctgtgcgtc
cagaccggcaagaacctctccgatccggaccgcttccgcttcgacggcaccggctattac
ctgaagtccaccgacgagatgtacgccatcgactcctcggacgcctggcaggagggctgc
cgcaacacgctcctggtcgccgagcagatcgacaacaacgggtggttcgagaagcgcgac
ctgatgccgcggttcgacgtccccgaggggtacaccgaggtcacctggttccaggaggag
gtcaagaaggggatggcccgccgcttccccggcggcgtccccgaggaccgtcagagcctg
gccgagtacgagatggacgtcatcatccagatggggttcccggggtacttcctcgtggtc
gccgacttcatcatgtgggccaagaacaacggcatcgcggtcggccccggccggggctcc
gcggccggctcgatcgtctcgtacgccatgggcatcaccgacctcgacccggtcgagcac
gggctgatcttcgagcggttcctcaaccccgagcgcgtgtccatgccggatgtcgacatc
gacttcgacgagcgtaggcgcggcgaggtcatccggtacgtcaccgagaaatacggccac
gacaaggtcgcccagatcggcacctacggcaccatcaaggccaagaacgccatcaaggac
tcggcccgggtgctcggctatccgtacgcgatgggcgaccgcatcaccaaggccatgccc
gccgacgtcctcggcaagggcatcccgctctccggtatcaccgatgagaagcacccccgc
tacagcgaggcgggcgaggtgcgcgggatgtatgagaacgagccggatgtgaagaaggtc
atcgacaccgcgcgcggtatcgagggcctggtgcgccagatgggtgtgcacgccgcgggt
gtgatcatgtcgagcgagacggtgaccgaccatgtgccggtcttctcgccgaagaacgac
ggccaggtcgtgacccagtgggactaccccacctgtgagtcgctcggcctgctgaagatg
gacttcctgggcctgcgcaacctcaccatcatggatgacgccgtcaagatggtgcgcgcc
aacaagggcatcgatctgaagatgctcgatctgtccctggacgaccccaagaccttcgaa
ctgctctgccgcggtgacaccctcggcgtcttccagttcgacggcggccccatgcgctcc
ctgctgcgcatgatgaagcccgacaacttcgaggacatttccgccgtctcggccctctac
cggccgggcccgatgggcatgaactcgcatatcaactacgcgctgcggaagaacgggcag
caggagatcaccccgatccaccccgagctggaggagccgctcaaggaggtcctcggcatc
acctacggcctcatcgtgtaccaggagcaggtgcagaaggccgcccaggtgctcgccggc
tattcgctgggccaggccgacctgctgcgccgtgccatgggcaagaagaagcccgaggtg
ctggagaaggagttcgtcaacttccagaagggcgcccgcgagaaggggtactccgacgag
gccatccaggcggtgtgggacgtcctggtcccgttcgccggatacgcgttcaacaaggcg
cactcctccgcgtacggcctggtcacctactggaccgcgtacctcaaggccaactacccc
gccgagtacatggcggcgctgctcacctcggtccgcgacgacaaggacaagtcggcggtc
tatctgaacgaatgccgccgcatgggcatcaaggtgctgccgccgaacgtcaatgagtcc
gaggccaacttcaccgcccagggcgacgatgtgatcctcttcggtctcacggcggtccgg
aacgtcggtcagaacgtggtggaggcgatcatccggggccgtaaggccaaggggaagtac
ggctcgttcccggactacctggacaaggtcgaggcggtcgtctgcaacaagcgcaccacc
gaatcgctgatcaaggcgggcgccttcgacgagatgggccacacccgtaaggggctcacg
gcgcactacgaggcgctgatcgacaatgtggtcgcggtcaagcgcaaggaggccgagggg
cagttcgacctcttcggcggcatgggcggtgacggcggtgacggcgacgggccgggcttc
ggcctcgacgtcgagttctcggacgtcgaatgggagaagacctatctgctggcccaggag
cgggagatgctgggcctgtatgtctccgaccatccgctgttcggcatcgagcatgtgctg
aacgagaaggcggatgccgcgatctccgcgctcaccgggggtgaacacgcggacggcgcg
atcgtcaccatcggcggcatcatctccggcctccagcgcaagatgaccaaacagggcaac
gcctgggccatcgccaccgtggaggacctggccggctccatcgagtgcatgttcttcccg
gccacctatcagctggtctccacccagctgatcgaggacgtggtcgtcttcgtcaagggc
cggctggacaagcgcgaggacgtgccccggctggtcgccatggagctgatggtccccgat
ctgtccgaggcgggtgccgacgcgcccgtgacgatcaccattcccacggtcaaggtcacc
ccgccgctggtcgagaagctcagcgaggtgctcacccaccaccgtggctccaccgaggtg
cggatcaagctccagggggcgcggaagaccaccgtgctccggctcgaccggcaccgcgtc
accgccgatccggcgctcttcggtgatctcaaggtgctgttgggggcgtcctgcctggcc
gggtga
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integrated database retrieval system
