Streptomyces solisilvae: I1A49_15095
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Entry
I1A49_15095 CDS
T07406
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ssoi
Streptomyces solisilvae
Pathway
ssoi00040
Pentose and glucuronate interconversions
ssoi01100
Metabolic pathways
ssoi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
I1A49_15095
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I1A49_15095
Enzymes [BR:
ssoi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
I1A49_15095
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
QPI61741
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All DBs
Position
complement(3810007..3811008)
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AA seq
333 aa
AA seq
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MTAVAAGVTAALALGGLSTVSAHGTDPADSARSNSTRATATRPVAETTPIGFGAGTTGGG
NATATTVTSLDAFKTAVTGDKAKVVRVSGLISLTGQVDIGSNTTVLGVGSGSGFTGGGLR
LKESTNVIVRNLDISKPRKPSDGITVQKSTKVWIDHNTFSADREHDKDYYDGLLDINHGS
DNITVSWNKFADHFKGSLVGHSDNNASEDTGHLKVTYHHNWFTNVYSRIPSLRFGTGHFY
DNYVQGAETGVHSRMGAQTLVENNVFRDTEVAVTTSRDSDVDGYAVLRGNDLGGAATEIS
RTGGFTTPPYAYTAEPASSVVATVTAQSGAGRL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ctgaccgcggtcgccgcgggcgtcaccgcggcgctcgccctcggcggcctctccacggtc
tccgcccatggcacggacccggccgactccgcacgctccaacagcacacgtgccaccgcc
acccgccccgtcgccgagaccacccccatcggcttcggcgccggcaccacgggcggcggg
aacgccaccgccaccaccgtgacctccctggacgccttcaagaccgccgtcacgggcgac
aaggccaaggtggtcagggtctccgggctgatctccctcaccggtcaggtggacatcggc
tccaacaccaccgtgctgggcgtgggttccggctccggtttcaccggcggcggactgcgg
ctgaaggagtcgacgaacgtcatcgtccgcaacctcgacatcagcaagccccggaagccg
tccgacggcatcaccgtgcagaagtcgacaaaggtgtggatcgaccacaacaccttctcg
gccgaccgcgagcacgacaaggactactacgacggtctgctggacatcaaccacggctcg
gacaacatcaccgtctcctggaacaagttcgccgaccacttcaagggcagcctggtcggc
cacagcgacaacaacgcgagcgaggacaccggtcacctcaaggtgacgtaccaccacaac
tggttcaccaatgtgtactcccgcatccccagcctgcgcttcggcaccggacacttctac
gacaactacgtccagggcgcggaaaccggagtgcactcccggatgggcgcgcagacgctg
gtcgagaacaacgtcttccgcgacaccgaggtggccgtcaccaccagccgggacagcgat
gtcgacggctatgcggtgctgcgcggcaacgacctgggcggggcggccaccgagatctcc
cggacgggcggcttcaccaccccgccgtacgcgtacacggcggaaccggcgtcctcggtc
gtggcgaccgtcaccgcccagtcgggcgcgggcaggctctga
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