Streptomyces malaysiensis HNM0141: I1A49_15325
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Entry
I1A49_15325 CDS
T07406
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ssoi
Streptomyces malaysiensis HNM0141
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoi03032
]
I1A49_15325
03036 Chromosome and associated proteins [BR:
ssoi03036
]
I1A49_15325
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_15325
DNA replication proteins [BR:
ssoi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I1A49_15325
Chromosome and associated proteins [BR:
ssoi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
I1A49_15325
DNA repair and recombination proteins [BR:
ssoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
I1A49_15325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
Lyx_isomer
Motif
Other DBs
NCBI-ProteinID:
QPI56123
UniProt:
A0ABX6W571
LinkDB
All DBs
Position
complement(3855368..3855709)
Genome browser
AA seq
113 aa
AA seq
DB search
MNKAQLINVVAQATGNRATARLAVESVLDAIVRAVAAGEVVSVTGFGSLTAEERPAHTAR
NPQTGERIQVGVSRIVKFRPGARFKDLVAGRRVMPESGNCIQKDPKTTKVARP
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcccagctcatcaacgtcgtggcccaggcgactggcaaccgcgctacggca
aggctcgccgtggaatccgtgctcgacgccatcgtccgtgccgtcgccgccggggaggtc
gtctccgtcaccgggttcgggagcctgaccgcagaggagcgcccggcgcataccgcgcgc
aacccgcagaccggcgagcggatacaggtcggcgtgagccgcatcgtgaagttccggcct
ggtgcccggttcaaggacctcgtcgcgggccgtcgtgtgatgcccgagagcggcaactgc
atccagaaggacccgaagacgaccaaggtcgcccgcccgtaa
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