Streptomyces malaysiensis HNM0141: I1A49_16755
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Entry
I1A49_16755 CDS
T07406
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ssoi
Streptomyces malaysiensis HNM0141
Pathway
ssoi03030
DNA replication
ssoi03430
Mismatch repair
ssoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I1A49_16755 (holA)
03430 Mismatch repair
I1A49_16755 (holA)
03440 Homologous recombination
I1A49_16755 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoi03032
]
I1A49_16755 (holA)
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_16755 (holA)
Enzymes [BR:
ssoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I1A49_16755 (holA)
DNA replication proteins [BR:
ssoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I1A49_16755 (holA)
DNA repair and recombination proteins [BR:
ssoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I1A49_16755 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
QatB
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
QPI56372
UniProt:
A0ABX6W4F0
LinkDB
All DBs
Position
complement(4138270..4139259)
Genome browser
AA seq
329 aa
AA seq
DB search
MARKTTTDDPLAPVTLAVGQEELLLDRAVQQVVAAARAADPDTDVRDLMPDALQPGTLAE
LTSPSLFAERKVVVVRNAQDLSADTIKDVKGYLGTPAEEITLVLLHAGGAKGKGLLDAAR
KAGAREVACPKMTKPADRLAFVRSEFRATGRSATPEACQSLVDAIGSDLRELASAVSQLV
ADVEGTIDEAVVARYYTGRAEASSFTVADRAVEGRAAEALEALRWAVSTGVAPVLITSAL
AQGVRAIGKLASAPRGARPGDLARELGMPPWKIDRVRQQMRGWSADGVAVALRAVAEADA
GVKGGGDDPEYALEKAVVTIARAARAGRR
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagacgacgaccgacgatccgctcgccccggtgacccttgccgtgggccag
gaggaactgctgctcgaccgcgcggtgcagcaggtggtggcggccgcccgcgcggccgac
cccgacaccgatgtgcgcgacctcatgcccgacgcgctccagcccggcaccctcgccgag
ctgaccagcccctcgctcttcgcggagcgcaaggtcgtggtggtgcgcaacgcacaggat
ctgtcggccgacacgatcaaggatgtgaagggctatctcggcacccccgccgaggagatc
accctggtgctgctgcacgcgggcggggccaagggcaaggggctgctcgacgccgcccgt
aaggccggggcgcgcgaggtcgcctgccccaagatgaccaagcccgccgaccgactggcg
tttgtgcggtcggagttccgcgccaccggccggtccgccacgcccgaggcatgccagtcc
ctggtcgacgccatcggcagcgatctgcgcgagctggccagtgcggtctcccagcttgtg
gccgatgtcgagggcacgatcgacgaggccgtcgtcgcccgctactacaccggccgtgcc
gaggcgtccagcttcactgtggccgaccgcgccgtcgagggccgtgcggccgaggcgctg
gaggcgctgcgctgggccgtctccaccggggtggcgccggtgctgatcaccagcgccctg
gctcagggcgtccgcgccatcggcaagctggcctccgcgccgcgcggcgcccgtcccggc
gatctcgcccgtgagctgggcatgccgccgtggaagatcgaccgggtgcggcagcagatg
cggggctggtcggcggacggggtggcggtcgcgctgcgtgccgttgccgaggccgatgcg
ggggtcaagggcggtggggacgatccggagtacgccttggagaaggcggtcgtcacgatt
gcccgcgcggcgcgggcggggcgtcgttag
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