Streptomyces malaysiensis HNM0141: I1A49_16920
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Entry
I1A49_16920 CDS
T07406
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
ssoi
Streptomyces malaysiensis HNM0141
Pathway
ssoi00550
Peptidoglycan biosynthesis
ssoi01100
Metabolic pathways
ssoi01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I1A49_16920 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I1A49_16920 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssoi01011
]
I1A49_16920 (mrdA)
Enzymes [BR:
ssoi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I1A49_16920 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssoi01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
I1A49_16920 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QPI56396
LinkDB
All DBs
Position
complement(4178189..4180333)
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AA seq
714 aa
AA seq
DB search
MSNIPQTGRTPRVTIRLVGLQILVFSLLLTLGGRLWYLQIRNGDEYTAEAANNHVQQVVH
PAVRGSILDARGVPLADNETRLVVSASRTELMKMPDDGEAVLTRLAEVLGMKPKDVLDKV
RLCDAKTPQPCWNGSPYQPIPITDEASAKQALQIREREEDFPGISAEPTAVRRYAAPAGS
NAAQVLGYLSPVTDEQVKEAEDTKSPLLRSDQVGSNGLERQYDSELRGEAGVTRYEVDNL
GRVIGQRESQRARPGANVVTSLDSRVQAVAEKELDQAMRDARKQHDRNTGTNYKADSGAV
VVMEAKTGRVVAMASNPTYDPNAWVGGISGKDYKQLTGKKSNFPLLNRAIQGQAAPGSIF
KVIPTTAAVNAGYDFNGPYACTSSFNIGGQVFKNFESENYGGISLGRALEVSCDTVFYRI
AYDEWKRDGGNKPKKKPGDWFYRTAHQFGLGKETGIDLPNEVTGRVPDRQWKKDYWKANK
DAWCKSGKKNGSYGERIAYENCLEGMKMRAGDSVNYSIGQGDTLVTPIQMATIYAAISNG
GTLHDPTVGKAIVSPDGKDITEIKPKSHGKLPISASLHKRIDSALAGVATRGTAAWRFQG
WPQDKIPMHAKTGTAEVYGKQTTSWFATYTKDYTVVMTISQGGTGSGASGPAVRKIYNAL
YGVDAKGGIDKKKALLPQPQAKLPKISSDGSVEAQPLGKQFEAAGRERRRGADS
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatattcctcagaccggacgcaccccccgggtcaccatccggctcgtcggcctc
cagatcctggtcttctcgttgctgctgaccctcggcggacgcctgtggtacctccagatc
cgcaacggcgacgagtacaccgccgaagccgccaacaaccacgtccagcaggtcgtccac
cccgccgtgcgcggctccatactggacgcccgcggggtgccgctggccgacaacgagacc
cgtctcgtggtctccgcgagccgcaccgagctgatgaagatgccggacgacggtgaggcc
gtcctcacccgtctcgccgaggtcctgggcatgaagcccaaggacgtcttggacaaggtc
cggctgtgcgacgccaagaccccccagccctgctggaacggttccccgtaccagcccatc
ccgatcaccgacgaggccagcgccaagcaggcgctccagatccgtgagcgcgaagaggac
ttccccggcatcagcgccgagcccaccgcggtgcgccgctacgccgcgcccgccggctcc
aacgccgcccaggtgctcggctatctctccccggtcaccgatgagcaggtgaaggaggcg
gaggacaccaagtcgccgctcctccgctccgaccaggtcggcagcaacggcctcgagcgc
cagtacgacagcgagctgcgcggcgaggcgggggtgacccgctatgaggtcgacaacctc
ggccgggtcatcggccagcgggagagccagcgggcccgccccggcgccaacgtcgtcacc
agcctcgactcacgcgtccaggcggtcgcggagaaggagctggaccaggcgatgcgggac
gcccgcaagcagcacgaccgcaacaccggcaccaactacaaggcggactccggcgcggtc
gtggtcatggaggccaagaccggccgggtggtggccatggcgtccaacccgacgtacgac
cccaacgcctgggtcggcggcatctccggcaaggactacaagcagctcaccggcaagaag
tccaacttcccgctgctcaaccgggcgatccagggccaggcggcccccggctcgatcttc
aaggtgatcccgaccaccgccgcggtcaacgccggctacgacttcaacggcccgtacgcc
tgcaccagctcgttcaacatcggcggccaggtcttcaagaacttcgagtccgagaactac
ggcgggatcagcctcggccgcgcgctggaggtctcctgcgacaccgtcttctaccggatc
gcctacgacgagtggaagcgggacggcggcaacaagcccaagaagaagccgggggactgg
ttctaccggaccgcccaccagttcggcctcggcaaggagaccggcatcgacctccccaac
gaggtcaccggccgggtcccggaccgccagtggaagaaggactactggaaggccaacaag
gacgcctggtgcaagagcggcaagaagaacggaagctacggcgagcggatcgcctacgag
aactgcctcgagggcatgaagatgcgcgccggtgactccgtgaactactccatcggccag
ggcgacaccctcgtcaccccgatccagatggccaccatctacgcggccatcagcaacggc
ggaacgctccacgacccgaccgtcggcaaggcgatcgtcagccccgacggcaaggacatc
acggagatcaagccgaagtcgcacggcaagctgccgatcagcgcctcgctgcacaagagg
atcgacagcgcgctcgcgggcgtggccacccggggcaccgccgcctggcggttccagggc
tggccgcaggacaagatcccgatgcacgccaagaccggtaccgcggaggtctacggcaag
cagaccacctcgtggttcgcgacgtacaccaaggactacacggtcgtcatgacgatctcc
cagggcggcaccggctccggggcctccggccccgccgtgcgcaagatctacaacgcgctg
tacggggtcgacgccaagggcggcatcgacaagaagaaggcgctgctgccccagccgcag
gccaaactgccgaagatctcgtcggacggctcggtcgaggcccagccgctgggcaagcag
ttcgaggcggccggccgggagcggcggcggggagctgactcgtga
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