Streptomyces malaysiensis HNM0141: I1A49_17695
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Entry
I1A49_17695 CDS
T07406
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ssoi
Streptomyces malaysiensis HNM0141
Pathway
ssoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I1A49_17695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_17695
Enzymes [BR:
ssoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
I1A49_17695
DNA repair and recombination proteins [BR:
ssoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I1A49_17695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
HHH_RecD2
AAA_30
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
NAT10_TcmA_helicase
PIF1
NPHP3_N
TraI_hel_assoc_N
AAA_16
PhoH
UvrD-helicase
nSTAND3
AAA
HTH_IclR
TrwB_AAD_bind
DEAD
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QPI56518
UniProt:
A0ABX6W4Z8
LinkDB
All DBs
Position
complement(4493654..4495897)
Genome browser
AA seq
747 aa
AA seq
DB search
MLKLAVVEGVLERITYANEENGYTVARVDTGRGSGDLLTVVGSLLGAQPGESLRMEGRWG
SHPQYGKQFTVENYQTVLPATVQGIRRYLGSGLIKGIGPRIADRITEHFGIDTLDVIEER
PERLIEVPGLGPKRTKMIAAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDASISIV
KNQPYRLAADVWGIGFLTADKIAQSVGIPHDSPDRVKAGLQYALSQSADQGHCYLPEEQL
IADAVKLLQVDTGLVIDCLGELAAEEEGVVREPVPGPEGGEPISAVYLVPFHRAEISLAG
QALRLLRTEEDRMPAFQGVDWDKALGWLASRTGADLAPEQSQAVRLALTEKVAVLTGGPG
CGKSFTVRSVVELARAKQAKVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYD
RDRPLDADLVVVDEASMLDLLLANKLAKAVPPGAHLLFVGDVDQLPSVGAGEVLCDLLAP
GSPVPAVRLTRIFRQAQQSGVVTNAHRINEGVPPVTQGLSDFFLFVEDDTEEAGRLTVDV
AARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAITPARPDVPERRFGGRVFRV
GDKVTQIRNNYEKGANGVFNGTVGVVTSLDTDEQRLTVRTDEDEEVPYDFDELDELAHAY
AVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGSRRALGQAVRTVS
AGRRCTALDHRLGGDVRVERVKRVSER
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaactcgcggtggtcgaaggggtcctggagcggatcacctacgccaatgaggaa
aacggctatacggtcgcccgggtcgacaccggccgtggctccggcgatctgctcaccgtc
gtcggctcgctgctgggcgcccagccgggcgagtcgctgcgcatggagggccgctggggt
tcccatccgcaatatggcaaacagttcacggtcgagaattaccagaccgtcctccccgcc
accgtccagggcatccggcgctatctcggctcgggcctgatcaagggcatcggcccccgc
atcgccgaccggatcaccgagcacttcggcatcgacaccctcgatgtcatcgaggagcgg
ccggagcggctgatcgaggtcccgggcctgggccccaagcgcaccaagatgatcgccgcc
gcctgggaggagcagaaggccatcaaggaggtgatggtcttcctccagggggtgggcgtc
tccacctccatcgcggtgcggatctacaaaaagtatggcgacgcgtcgatttcgattgtg
aagaaccagccgtaccggctggcggccgacgtctggggcatcggctttctcaccgccgac
aagatcgcccagtcggtcggcatcccccatgacagccccgaccgggtgaaggccggtctc
cagtacgcgctgtcccagtccgccgaccagggccactgctatctccccgaggagcaactc
atcgcggacgccgtgaagttgctccaggtggacaccggcctggtcatcgactgcctgggc
gagctcgccgccgaggaggagggcgtggtgcgcgagccggtcccgggcccggagggcggc
gagccgatctccgccgtctatctggtgcccttccaccgcgccgagatctccctcgcgggc
caggcgctgcggctgctgcgcaccgaggaggaccggatgcccgccttccagggcgtggac
tgggacaaggcgctgggctggctggcgagccgcaccggcgccgatctggcgcccgagcag
agccaggcggtgcggctcgcgctgaccgagaaggtggcggtgctcaccggcgggccgggc
tgcggcaagtccttcacggtgcggtccgtggtggagctcgcccgcgccaagcaggccaag
gtggtgctcgcggcgcccaccggccgggccgccaagcggctgtccgagctgaccggcgcc
gaggcgtccaccgtccaccggctgctggagctcaagcccggcggggacgcggcgtacgac
agggaccgcccgctcgacgcggatctcgtggtggtcgacgaggcgtcgatgctcgatctg
ctgctggccaacaagctggccaaggcggttccgcccggtgcccatctgctcttcgtcggg
gatgtggaccagctgcccagcgtgggcgccggcgaggtgctgtgcgatctgctggccccc
ggcagccccgtcccggcggtgcggctgacccggatcttccgccaggcccagcagtccggg
gtggtcaccaacgcccaccggatcaacgagggggtgccgccggtcacccagggcctgtcg
gatttctttctcttcgtcgaggacgacaccgaggaggccgggcggctcacggtcgatgtc
gcggcccgccgcatccccgcgaagttcggcctcgatccccgccgtgacgtgcaggttctg
gccccgatgcaccggggcccggcgggcgccggcacgctcaacggactgcttcagcaggcc
atcaccccggcccgcccggacgtcccggagcgccgcttcggcggccgggtcttccgggtc
ggcgacaaggtgacccagatccgtaacaattatgagaaaggggccaacggggtcttcaac
ggcacggttggcgtcgtcacctcactcgacaccgatgagcagcggctgaccgtgcggacg
gacgaggacgaggaggtaccgtacgacttcgacgagctggacgagctggctcatgcctat
gcggtgaccatccatcggtcccagggcagtgagtacccggccgtcgtgatcccggtgacc
accggggcctggatgatgttgcaacgcaacctcctgtacacggccgtgacgcgtgccaag
cgccttgtggtgctggtcggctcgcgccgtgcgctcgggcaggcggtgcgcaccgtctcg
gcggggaggcgctgtaccgcgctggatcaccgactcggcggcgatgtgagagtcgagcgt
gtcaagagggtttccgaacgatga
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