Streptomyces malaysiensis HNM0141: I1A49_22040
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Entry
I1A49_22040 CDS
T07406
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ssoi
Streptomyces malaysiensis HNM0141
Pathway
ssoi03030
DNA replication
ssoi03430
Mismatch repair
ssoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I1A49_22040
03430 Mismatch repair
I1A49_22040
03440 Homologous recombination
I1A49_22040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoi03032
]
I1A49_22040
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_22040
Enzymes [BR:
ssoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I1A49_22040
DNA replication proteins [BR:
ssoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I1A49_22040
DNA repair and recombination proteins [BR:
ssoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I1A49_22040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNApol3-delta_C
AAA_22
AAA_5
Mg_chelatase
MCP1_SIFV
RNA_helicase
AAA_29
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QPI57237
UniProt:
A0ABX6W6X3
LinkDB
All DBs
Position
complement(5501869..5503086)
Genome browser
AA seq
405 aa
AA seq
DB search
MAVWDDLVGQDRVAAQLTAAARDADVLVTGAADASAAEPMASSRMTHAWLFTGPPGSGRS
TAARAFAAALQCVSPDRALGGAPGCGFCDGCHTALVGTHADVEVVRTDMLTIGVKETRDL
VRRAQLSPAGGRWQVIVMEDADRLTEGAGNVLLKAVEEPAPRTVWLLCTPSLEDVLPTIR
SRCRLLTLRTPSVDAVADVLVRRDGIDPGLAASAARATQGHIGRARRLATDERARTRRAA
VLKLPLRVDDVGGCLKAAQELVDAAAEDAKQVAEEIDTKETEELRAALGAAAGTGGRLPR
GTAGAMKDLQDRQKRRATRTQRDSLDLALTDLTAFYRDVLALQLGSEVALANTDVRDALE
RIASGSKPERTLRRIEAIRACRQALDSNVAPLLAVEAMTMALRAG
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtgggacgacctggtcgggcaggaccgagtagcggcccagctgacggctgcc
gcgcgggatgcggacgtgctggtcacgggggcggccgacgcgtccgccgcggagcccatg
gcgtcgtccaggatgacccacgcctggctgttcaccgggccgcccggctccggccggtcc
accgccgcccgtgccttcgccgccgcgttgcagtgcgtcagcccggaccgggcgctcggc
ggcgcccccggctgtggcttctgcgacggctgtcacaccgccctcgtcggcacccacgcc
gatgtggaggtggtccgcacggacatgctcaccatcggcgtcaaggagacccgtgacctg
gtccgtcgtgctcagctgtcgcccgccggcggccggtggcaggtgatcgtcatggaggac
gccgaccgccttaccgagggcgcgggcaatgtgctcctcaaggccgtcgaggagcccgcg
ccgcgcaccgtatggctgctgtgcacgccctcgctggaggatgtgctgcccacgatccgc
tcccgctgccgcctcctcaccctccgtacgccttcggtggacgccgtggcggacgtcctc
gtccggcgcgacggcatcgaccccgggctcgccgcctccgccgcccgcgccacccagggc
catatcggccgcgcccgccgtctggccaccgacgagcgggcccgcacccgccgcgccgcc
gtcctgaagctcccgctgcgcgtcgacgacgtgggcggctgcctgaaggcggcccaggag
ctggtcgacgcggcggccgaggacgccaagcaggtggcggaggagatcgacaccaaggag
accgaggagttgcgcgccgccctgggtgccgccgccggtacgggcgggcggctgccgcgc
ggcacggccggggccatgaaggatctccaggaccgccagaagcgccgtgccacccgcacc
cagcgcgacagcctcgaccttgcgctcaccgatctgaccgcgttctaccgggatgtgctg
gccctccagctcggctccgaggtcgcgctcgccaacaccgatgtacgggacgcgctggag
cggatcgcgtcgggttcgaagcccgagcggacactgcgccggatagaggcgatcagggcc
tgccgccaggcgctggacagcaatgtggcgccgctgctggcggtcgaggcgatgaccatg
gcgctgcgggccggctga
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