Streptomyces malaysiensis HNM0141: I1A49_22050
Help
Entry
I1A49_22050 CDS
T07406
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ssoi
Streptomyces malaysiensis HNM0141
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoi03032
]
I1A49_22050 (topA)
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_22050 (topA)
Enzymes [BR:
ssoi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I1A49_22050 (topA)
DNA replication proteins [BR:
ssoi03032
]
Prokaryotic type
DNA Topoisomerases
I1A49_22050 (topA)
DNA repair and recombination proteins [BR:
ssoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I1A49_22050 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QPI57238
LinkDB
All DBs
Position
complement(5506975..5509815)
Genome browser
AA seq
946 aa
AA seq
DB search
MSPTTSETAQGGRRLVIVESPAKAKTIKGYLGPGYVVEASVGHIRDLPNGAAEVPDKYTG
EVRRLGVDVEHDFQPVYVVNADKKSQVKKLKELLADSDELFLATDEDREGEAIAWHLQEV
LKPKVPVRRMVFHEITKDAIRAAVANPRELNQRLVDAQETRRILDRLYGYEVSPVLWKKV
MRGLSAGRVQSVATRLVVERERERIAFRSAEYWDLTGTFATGRAGDISDPGTFGARLTAV
DGLRVAQGRDFTSLGLLKEGLNVLHLDEAGARSLVTALADTAFTVRSVESKPYRRSPYAP
FRTTTLQQEASRKLGFGAKATMQVAQKLYENGYITYMRTDSTTLSDTAVAAARAQVTQLY
GADYLPDRPRTYAGKVKNAQEAHEAIRPSGDRFRTPAETGLTGDQFRLYELIWKRTVASQ
MKDAIGNSVTVKIGGRASDGRDAEFSASGKTITFHGFMKAYVEGADDPNAELDDRERRLP
QVAEGDRLTADEITADGHATKPPARYTEASLVKELEEREIGRPSTYATILGTILDRGYVF
KKGTALVPSFLSFAVVNLLEKHFGRLVDYDFTAKMEDDLDRIARGEAEAVPWLKRFYFGE
GAQGGAAEAGNGDGDHLGGLKELVTDLGAIDAREISSFPVGDGIVLRVGRYGPYVERPAE
VEGGTGRRADVPDDLPPDELSVELADELLAKPSGEFELGPDPETGRMIVAKDGRYGPYVT
EVLPEDTPKSGKNAIKPRTASLLKSMSLDTVTLEDALKLMSLPRVVGADPEGVEITAQNG
RYGPYLKKGTDSRSLESEDQIFAITLEQALAIYAQPKQRGRAAAKPPLKELGTDPVSERP
VVVKDGRFGPYVTDGETNATLRRDDDVETITPERGYELLAEKRAKGPAKKTAKKAAAKKT
TAAKKTAAKKTTAKKTAAKKTTAKKTTAKTAAKKTAAAEKSSANAE
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
ttgtccccgaccaccagcgagaccgcacagggcggccgccgactcgtcatcgtcgagtcg
cctgccaaggcgaagacgatcaagggctacctcggcccgggctacgtggtcgaggccagc
gtcgggcacatccgggatctgccgaacggtgcggccgaggtccccgacaagtacaccggc
gaggtccggcgcctcggcgtggacgtcgaacatgacttccagcccgtctacgtggtcaac
gcggacaagaagagccaggtcaagaagctcaaggagctgctcgccgactccgacgagctc
ttcctggccaccgatgaggaccgcgagggcgaggccatcgcctggcacctccaggaggtc
ctcaagcccaaggtcccggtccgccggatggtcttccacgagatcaccaaggacgccatc
cgggccgccgtggccaacccgcgcgagctgaaccagcgcctggtcgacgcccaggagacc
cgccgcatcctcgaccgcctctacggctacgaggtctcgccggtcctgtggaagaaggtc
atgcgcggcctgtccgcgggccgggtccagtcggtcgccacccgtctcgtcgtcgagcgc
gagcgcgagcgcatcgccttccgctccgccgagtactgggacctcaccggcacctttgcc
accggccgggcgggtgacatcagcgaccccggcaccttcggtgcccgccttacggccgtc
gacggcctccgtgtcgcccaggggcgtgatttcacctcgctcgggctgctcaaggagggc
ctcaacgtcctccatctggacgaggcgggcgcccgctccctggtcacggccctggccgac
accgctttcacggtgcgctcggtcgagtccaagccgtaccgccgctcgccgtacgcgccg
ttccgtacgacgaccttgcagcaggaggccagccgcaagctgggcttcggcgccaaggcc
accatgcaggtcgcgcagaagctgtacgaaaacggctacatcacctatatgcgtacggac
tccaccaccctgtcggacacggcggtggcggcggcccgggcgcaggtgacccagctctac
ggcgccgactatctgccggacaggccgcgcacctacgcgggcaaggtcaagaacgcccag
gaggcgcacgaggccatccgcccctcgggagaccgtttccgcacccccgcggagaccggc
ctcacgggcgaccagttccggctctatgagctgatctggaagcggaccgtcgcctcccag
atgaaggacgcgatcggaaactcggtcaccgtcaagatcggcgggcgggcgagcgacggc
cgggacgcagagttctccgcctccggtaagacgatcaccttccacggcttcatgaaggcg
tacgtggagggcgccgacgatccgaacgccgagctggacgaccgcgagcgccggctgccg
caggtcgccgagggcgaccggctcaccgccgacgagatcaccgccgacggtcacgcgacc
aagcctccggcccgctacactgaggcgtcgctggtcaaggagctcgaagagcgcgagatc
ggccgcccctcgacctatgccacgatcctgggcaccatcctcgaccgcggctacgtcttc
aagaagggcaccgcgctcgtgccctccttcctgagcttcgccgtcgtcaacctgctggag
aagcacttcggccgactggtcgactacgacttcaccgccaagatggaggacgacctcgac
cgcatcgcgcgcggcgaggccgaggccgtgccgtggctgaagcgcttctacttcggcgag
ggcgcccagggcggcgccgccgaggccgggaacggcgacggcgaccacctcggcggcctc
aaggagctggtcaccgacctgggcgcgatcgacgcccgggagatctcgtccttccccgtg
ggcgacggcatcgtgctgcgcgtcggccgctacgggccgtacgtcgagcgccctgccgag
gtcgagggcggcaccggccggcgtgccgacgtccccgacgacctgccgcccgacgagctg
agcgtggagctcgccgacgagctgctggccaagccgagcggtgagttcgagctgggcccc
gaccccgagaccggtcgcatgatcgtcgccaaggacggccgctacggtccgtacgtcacc
gaggtgctccccgaggacacccccaagagcggcaagaacgcgatcaagccgcgcacggcg
tccctcctcaagtcgatgtccctggacacggtgaccctggaggacgcgctcaagctgatg
tcgctgccgcgtgtggtcggcgccgaccccgagggcgtggagatcaccgcgcagaacggc
cgctacggcccgtacctgaagaagggcacggactcgcggtcgctggagagcgaagaccag
atcttcgccatcacgctcgagcaggcgctggcgatctacgcccagcccaagcagcgcggc
cgggccgcggccaagccgccgctgaaggagctgggcaccgacccggtcagcgagcgtccc
gtggtggtcaaggacggccgcttcggcccgtacgtcacggacggcgagaccaacgcgacg
ctgcgccgcgacgacgacgtggagaccatcacgcccgagcgcggctacgagctgctcgcc
gagaagcgcgccaagggcccggccaagaagaccgccaagaaggcggcggccaagaagacg
accgcggccaagaagacggcggcgaagaagaccaccgccaagaagaccgcggcgaagaag
acgaccgccaagaagacgaccgcgaagaccgccgccaagaagacggcggcggccgagaag
tcgtcggccaacgccgagtag
DBGET
integrated database retrieval system
