Streptomyces solisilvae: I1A49_26445
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Entry
I1A49_26445 CDS
T07406
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
ssoi
Streptomyces solisilvae
Pathway
ssoi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
I1A49_26445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssoi03021
]
I1A49_26445
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_26445
Enzymes [BR:
ssoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
I1A49_26445
Transcription machinery [BR:
ssoi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
I1A49_26445
DNA repair and recombination proteins [BR:
ssoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
I1A49_26445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
QPI57979
LinkDB
All DBs
Position
6481521..6482543
Genome browser
AA seq
340 aa
AA seq
DB search
MLIAQRPSLTEEVVDEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFTTVPGVKEDVTDLILNIKQLVVSSEHDEPVVMYLRKQGPGLVTAADIAPPAGVEVHN
PDLVLATLNGKGKLEMELTVERGRGYVSAVQNKQVGQEIGRIPVDSIYSPVLKVTYKVEA
TRVEQRTDFDKLIVDVETKQAMRPRDAMASAGKTLVELFGLARELNVDAEGIDMGPSPTD
AALAADLALPIEELELTVRSYNCLKREGIHSVGELVARSEADLLDIRNFGAKSIDEVKAK
LAGMGLALKDSPPGFDPTAAADAFGADDDADAGFVETEQY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtccctcgttgaccgaagaggtcgtcgacgagttccgctcccgg
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggaaactccctgcgtcgt
acgctcctctcctcgatccccggtgcggctgtcaccagcatccggatcgacggggtcctg
cacgagttcaccaccgtgccgggcgtcaaggaggacgtcaccgacctgatcctcaacatc
aagcagctggtcgtctcgagcgagcacgacgagccggttgtgatgtacctgcgcaagcag
ggcccgggtctggtcaccgccgccgacatcgccccgccggccggtgtcgaggtgcacaac
ccggacctggtcctggccacgctgaacggcaagggcaagctggagatggagctgaccgtc
gagcgcggtcgcggctatgtctccgccgtgcagaacaagcaggtcggccaggagatcggc
cggatcccggtcgactcgatctactcgccggtgctcaaggtcacctacaaggtcgaggcg
acccgtgtcgagcagcgcaccgacttcgacaagctgatcgtcgacgtcgagaccaagcag
gccatgcggccgcgcgacgccatggcgtcggccggtaagaccctggtcgagctgttcggc
ctggcccgcgagctcaatgtggacgccgagggcatcgacatgggcccgtccccgacggac
gccgccctcgccgccgatctggcgctgccgatcgaggagctcgagctcaccgtccgttcg
tacaactgcctgaagcgcgagggcatccactccgtgggtgagctcgtggcgcgctccgag
gcggacctgctcgacatccggaacttcggcgccaagtcgatcgacgaggtcaaggcgaag
ctggccgggatgggcctggcgctcaaggacagcccgcccggattcgacccgaccgccgcc
gctgacgccttcggcgccgacgacgacgcggatgcgggtttcgtcgagaccgagcagtac
tag
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integrated database retrieval system
