KEGG   Streptomyces malaysiensis HNM0141: I1A49_27085
Entry
I1A49_27085       CDS       T07406                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
ssoi  Streptomyces malaysiensis HNM0141
Pathway
ssoi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ssoi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    I1A49_27085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssoi03400]
    I1A49_27085
DNA repair and recombination proteins [BR:ssoi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     I1A49_27085
SSDB
Motif
Pfam: Ku HC2
Other DBs
NCBI-ProteinID: QPI58095
UniProt: A0ABX6W9G6
LinkDB
Position
complement(6641758..6642900)
AA seq 380 aa
MRSIWNGNISFGLVSIPIKMYPATEDHSISFRQIHTRDGGRIRYRKVCELEDKPIESGEI
GRAYEDADGALVPITDEDLAALPLPTTHTLEIEAFISASEIDPLQLGDAYYLGTSGAAGA
KPYTLLREALKRSGKVAIAKYAHRGRERLGMLRVVGDTIALHRLLWPDEVREPAGVAPKE
KVTVKPAELDLADTLMETLGEVDISELHDDYHEALEELVAAKMSGATPAAEPGERPSGAQ
VVDLMAALKESVRSARQSRGEEGVGEAAAAGEAGDASEGGAEEEAEATVHELRGRKRAPA
KKAAAAKKAPAAVAEKKTAGARRGGTKAAKAAEKAAEKEPAEKGAAKAAAKRAGAKKAAA
KKSAAKKATAKKQAGKRTAS
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgcgatctatctggaatgggaacatttccttcggcctggtgagcattccgatcaagatg
tatccggccaccgaggaccactcgatctcgttccggcagatccacacccgcgacggcggc
cgcatccgctaccgcaaggtctgcgagctcgaggacaagccgatcgagtcgggcgagatc
gggcgggcgtacgaggacgcggacggagcgctggtcccgatcaccgacgaggacctcgcg
gcccttccgctgcccaccacccacaccctggagatcgaggcgttcatctccgcctccgag
atcgatccgctccagctgggcgacgcctactacctgggcaccagcggcgccgccggggcc
aagccgtacaccctgctgcgtgaggcgctcaagcgcagcgggaaggtcgccatcgccaaa
tacgcccaccggggccgcgagcggctggggatgctccgcgtcgtgggcgacaccatcgcg
ctgcaccggctgctctggccggacgaggtgcgcgagcccgcgggggtggcccccaaggag
aaggtgaccgtgaaaccggccgaactggacctcgccgacaccctgatggagacgctcgga
gaggtggacatcagcgagctgcacgacgactaccacgaggcgctggaggagctggtggcg
gcgaagatgtccggcgccacgcccgcggccgaacccggtgagcggccctcgggcgcgcag
gtggtcgacctgatggcggccctgaaggagagcgtccgcagcgccaggcagtcccggggc
gaggagggggtcggggaggccgcggcggcgggggaggccggtgacgcctcggagggcgga
gccgaggaggaggcggaggctacggtccacgagttgcgcggccgtaagagggccccggcg
aagaaggccgcggcggctaagaaggcgcccgcggccgtggccgagaagaagaccgcgggg
gcgaggaggggcgggacgaaggccgccaaggcggcggagaaggctgcggagaaggagcct
gcggagaagggcgccgcgaaggccgccgcgaagagggcgggtgcgaagaaggctgcggcc
aagaagagtgcggccaagaaggccaccgcgaagaagcaggcgggcaagcggaccgcctcc
tga

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