Streptomyces malaysiensis HNM0141: I1A49_27085
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Entry
I1A49_27085 CDS
T07406
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
ssoi
Streptomyces malaysiensis HNM0141
Pathway
ssoi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
I1A49_27085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_27085
DNA repair and recombination proteins [BR:
ssoi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
I1A49_27085
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
QPI58095
UniProt:
A0ABX6W9G6
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All DBs
Position
complement(6641758..6642900)
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AA seq
380 aa
AA seq
DB search
MRSIWNGNISFGLVSIPIKMYPATEDHSISFRQIHTRDGGRIRYRKVCELEDKPIESGEI
GRAYEDADGALVPITDEDLAALPLPTTHTLEIEAFISASEIDPLQLGDAYYLGTSGAAGA
KPYTLLREALKRSGKVAIAKYAHRGRERLGMLRVVGDTIALHRLLWPDEVREPAGVAPKE
KVTVKPAELDLADTLMETLGEVDISELHDDYHEALEELVAAKMSGATPAAEPGERPSGAQ
VVDLMAALKESVRSARQSRGEEGVGEAAAAGEAGDASEGGAEEEAEATVHELRGRKRAPA
KKAAAAKKAPAAVAEKKTAGARRGGTKAAKAAEKAAEKEPAEKGAAKAAAKRAGAKKAAA
KKSAAKKATAKKQAGKRTAS
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcgatctatctggaatgggaacatttccttcggcctggtgagcattccgatcaagatg
tatccggccaccgaggaccactcgatctcgttccggcagatccacacccgcgacggcggc
cgcatccgctaccgcaaggtctgcgagctcgaggacaagccgatcgagtcgggcgagatc
gggcgggcgtacgaggacgcggacggagcgctggtcccgatcaccgacgaggacctcgcg
gcccttccgctgcccaccacccacaccctggagatcgaggcgttcatctccgcctccgag
atcgatccgctccagctgggcgacgcctactacctgggcaccagcggcgccgccggggcc
aagccgtacaccctgctgcgtgaggcgctcaagcgcagcgggaaggtcgccatcgccaaa
tacgcccaccggggccgcgagcggctggggatgctccgcgtcgtgggcgacaccatcgcg
ctgcaccggctgctctggccggacgaggtgcgcgagcccgcgggggtggcccccaaggag
aaggtgaccgtgaaaccggccgaactggacctcgccgacaccctgatggagacgctcgga
gaggtggacatcagcgagctgcacgacgactaccacgaggcgctggaggagctggtggcg
gcgaagatgtccggcgccacgcccgcggccgaacccggtgagcggccctcgggcgcgcag
gtggtcgacctgatggcggccctgaaggagagcgtccgcagcgccaggcagtcccggggc
gaggagggggtcggggaggccgcggcggcgggggaggccggtgacgcctcggagggcgga
gccgaggaggaggcggaggctacggtccacgagttgcgcggccgtaagagggccccggcg
aagaaggccgcggcggctaagaaggcgcccgcggccgtggccgagaagaagaccgcgggg
gcgaggaggggcgggacgaaggccgccaaggcggcggagaaggctgcggagaaggagcct
gcggagaagggcgccgcgaaggccgccgcgaagagggcgggtgcgaagaaggctgcggcc
aagaagagtgcggccaagaaggccaccgcgaagaagcaggcgggcaagcggaccgcctcc
tga
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