Streptomyces malaysiensis HNM0141: I1A49_32105
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Entry
I1A49_32105 CDS
T07406
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
ssoi
Streptomyces malaysiensis HNM0141
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssoi03009
]
I1A49_32105 (rimO)
Enzymes [BR:
ssoi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
I1A49_32105 (rimO)
Ribosome biogenesis [BR:
ssoi03009
]
Prokaryotic type
ribosomal protein modification factors
I1A49_32105 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
QPI58922
LinkDB
All DBs
Position
7787395..7788891
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AA seq
498 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEEAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDQGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYADISGRLQTIL
SGGIHASHTPRDRRKLLPISPAERQDATSVALPGHAQDTAPEDLPQGVAPASGPRAPLRR
RLDSSPVASVKLASGCDRRCSFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEVMLVSE
NNTSYGKDLGDIRLLETLLPELAAVDGIERIRVSYLQPAEMRPGLIDVLTSTEKVAPYFD
LSFQHSAPGVLRAMRRFGDTDRFLELLETIRGKAPQAGARSNFIVGFPGETEEDLAELER
FLSEARLDAIGVFGYSDEDGTEAAGYANKVDPDVVAERLERVSRLAEELTAQRAEERLGE
VVEVLVEEIDETGAVLGRGAHQAPETDGQTLLGTDGEPEVGRMVEAKVIATEGVDLVAEP
LVPLERQGGGTSTGEADR
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgcaccgtcgcccttgtcactcttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcttggcggcggacggctgggagctcgtcgaggaagccgcc
gacgccgacgtcgccgtcgtcaacacctgtggcttcgtcgaggccgccaagaaggactcg
gtcgacgccctgctggaggcgaacgatctgaaggaccagggccgcactcaggccgtggtg
gccgtcggctgcatggccgagcgatacggcaaggagctcgcggaggcgctgcccgaggcc
gacggggtgctcggcttcgacgactacgccgacatctccggccgcttgcagaccatcctc
tccggcggcatccacgcctcccacaccccgcgcgaccgccgcaagctgctgccgatcagc
ccggccgagcggcaggacgccacctcggtggcgctgcccggccacgcccaggacaccgcg
cccgaggacctgccccaaggggtggccccggcctccgggccacgggccccgctgcgccgc
agactggacagcagcccggtcgcctcggtgaagctggcctccggctgcgaccggcggtgc
tcgttctgcgccatcccgtccttccgcggctccttcatctcccgccgcccctccgatgtg
ctgggcgagacccgctggctggccgagcagggggtgaaggaggtcatgctggtctcggag
aacaacacctcgtacggcaaggacctcggggacatccggctgctggagacgctgctgccg
gagctggccgcggtggacggcatcgagcggatccgggtcagctatctccagcccgccgag
atgcgccccgggctgatcgacgtgctcacctcgaccgagaaggtcgcgccgtacttcgac
ctgtccttccagcactcggcgcccggagtgctgcgcgccatgcgccgcttcggcgacacc
gaccggttcctggagctgctcgagacgatcagaggcaaggcgccgcaggccggcgcccgg
tcgaacttcatcgtcggcttccccggtgagaccgaggaggacctggccgagctcgagcgc
ttcctcagcgaggcgcggctggacgcgatcggcgtcttcgggtactcggacgaggacggc
accgaagccgccggttacgcgaacaaggtcgatcccgatgtggtcgcggagcgtctggag
cgcgtctcgcggctcgcggaggagctgaccgcccagcgggccgaggagcggctcggcgag
gtcgtcgaggtgctggtggaggagatcgacgagaccggggcggtcctcggccgcggcgcc
caccaggcgccggagaccgatggccagacgctgctcggcaccgatggggagccggaggtg
ggccgtatggtcgaagcgaaggtgatcgcgacggagggagtggacctcgtcgcggagccg
cttgtgccgctggaacgacagggcggcggcacgtccaccggggaggctgacagatga
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