Streptomyces solisilvae: I1A49_33285
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Entry
I1A49_33285 CDS
T07406
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
ssoi
Streptomyces solisilvae
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssoi03016
]
I1A49_33285
Enzymes [BR:
ssoi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
I1A49_33285
Transfer RNA biogenesis [BR:
ssoi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
I1A49_33285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
QPI59133
LinkDB
All DBs
Position
complement(8100208..8101485)
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AA seq
425 aa
AA seq
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MTDAQETAAETTLRTTGGAPPDDLPPAPVPLLEPREGIPPVTADADALAEVIATFAAGHG
PVAVDAERASGYRYGQRAYLVQLRRAGAGTALIDPVGCPDLSGLGAVIADAEWVLHAATQ
DLPCLRDIGMVPARIFDTELAGRLAGFARVGLGAMVENILGYALEKGHSAVDWSTRPLPE
PWLHYAALDVELLVDLRDALEEELTRQGKLDWAHQEFAAIAAAPPAPPRKDPWRRTSGMH
KVRRRRQMAVVRELWTARDRIAQRRDVSPGKVLGDAAIVEAALALPANVRALAALSGFGH
RMNRRQLEQWQAAVDRARALPEADLPQPGQPVAGPPPPRAWADKDPAAAARLSAARAAVT
QLAEQLNLPQENLIAPDTVRRLCWEPPAEPTTDAIASVLAGHGARSWQIDQVTPVLTAAL
LTPPA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagagaccgcagcagagacgacactgcgaaccaccgggggcgctcct
ccggacgacctccccccggcgccggtccccttgctggagccgcgtgagggcatcccgccc
gtcaccgcggacgcggacgccctcgccgaggtcatcgcgaccttcgccgcgggccacggc
ccggtggccgtcgatgccgagcgcgcctccggctaccgctacggacagcgggcctatctg
gtccagctgcgccgggccggagcggggaccgcactgatcgaccccgtcggctgccccgac
ctgtccggtctgggcgccgtgatcgccgacgccgaatgggtgctgcacgccgcgacccag
gatctgccctgtctgcgggacataggcatggtcccggcccggatcttcgacaccgaactc
gcgggccggctggccggattcgcccgggtggggctgggcgccatggtcgagaacatcctc
ggatacgccctggagaagggccactccgcggtcgactggtccacccgcccgctgcccgag
ccctggctgcactacgccgcgctcgatgtcgagctgctggtggatctgcgcgacgcgctg
gaggaggagctgacgcggcagggcaagctggactgggcgcaccaggagttcgcggccatc
gccgcggccccgcccgccccgccgcgcaaggatccctggcggcgtacgtcggggatgcac
aaggtgcggcggcgccggcagatggccgtggtgcgcgagctgtggacggcgcgggaccgg
atcgcccagcgccgcgatgtctcaccgggcaaggtgctgggcgacgcggccatcgtcgag
gccgcgctggccctgccggccaacgtgcgggcgctggccgcgctcagcggtttcggccac
cggatgaaccggcgccagctggagcagtggcaggccgcggtggaccgggcgcgggccctg
ccggaggccgaccttccgcagccgggccagccggtggccggtccgcccccgccgcgggcg
tgggccgacaaggacccggccgcggcggcgcggctctccgcggcgcgtgcggccgtcacc
caactggccgaacagctgaatcttccgcaggagaacctgatcgccccggacaccgtccgg
cggctgtgctgggagccgcccgccgagccgacgacggatgcgatcgcctccgttctcgca
ggtcacggcgcccgctcctggcagatcgaccaggtgaccccggtgctgacggccgccttg
ctgacgccgcccgcctga
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