Streptomyces malaysiensis HNM0141: I1A49_33610
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Entry
I1A49_33610 CDS
T07406
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ssoi
Streptomyces malaysiensis HNM0141
Pathway
ssoi03030
DNA replication
ssoi03430
Mismatch repair
ssoi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssoi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I1A49_33610
03430 Mismatch repair
I1A49_33610
03440 Homologous recombination
I1A49_33610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssoi03032
]
I1A49_33610
03400 DNA repair and recombination proteins [BR:
ssoi03400
]
I1A49_33610
Enzymes [BR:
ssoi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I1A49_33610
DNA replication proteins [BR:
ssoi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I1A49_33610
DNA repair and recombination proteins [BR:
ssoi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I1A49_33610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QPI59186
UniProt:
A0ABX6WGX7
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All DBs
Position
8174926..8175648
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AA seq
240 aa
AA seq
DB search
MGWHRGLLIGFDLETTGTDPRTARIVTAAVVEARGGEPIGRREWLADPQVPIPDDAVAVH
GITNERAAAEGRPAREVVEEVAEVLVAHWRSGAPVVAYNAAFDLSLLAAELGRHGLRPLS
ERLEGAETGPVVDPYTIDRAVDRYRKGKRTLEAVCGEYGVVHDRAHDAGADALAAVRVAC
ALAERHREVAGLELWDLHRKQVGWYAHWAADFQSWLRRKGTPDAVVDGGWPLREAEATVG
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgggctggcaccgggggctgctgatcggattcgatctggagacgacgggcaccgatccg
cggacggcgaggatcgtcacggcggccgtggtcgaggcgaggggcggggagccgatcggc
cggcgcgagtggctggccgacccccaagtgcccataccggacgacgcggtggcggtgcac
gggatcaccaatgagcgggcggcggcggagggccggcccgcgcgtgaggtggtagaggag
gtcgccgaggtgctggtggcccactggcgctccggcgccccggtggtggcgtacaacgcg
gcgttcgacctcagcctgctcgccgccgagttggggcggcacgggctgcgcccgctgagc
gagcggctggaaggggcggagaccggccccgtcgtggatccgtacacgatagaccgcgcc
gtcgaccgctatcgcaagggcaagcgcacgctggaggcggtgtgcggggagtacggcgtg
gtgcacgaccgcgcccatgacgccggtgcggacgcgctggcggcggttcgggtcgcctgc
gcgctcgccgagcgccaccgcgaggtcgccgggctcgagctgtgggacctccaccgcaag
caggtggggtggtacgcccactgggcggccgacttccagtcctggctgcgccgcaagggc
acgccggacgcggtggtggacggcggctggcccctgcgggaggcggaggcgacggtgggg
taa
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