KEGG   Streptomyces malaysiensis HNM0141: I1A49_36220
Entry
I1A49_36220       CDS       T07406                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
ssoi  Streptomyces malaysiensis HNM0141
Pathway
ssoi03030  DNA replication
ssoi03430  Mismatch repair
ssoi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ssoi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I1A49_36220
   03430 Mismatch repair
    I1A49_36220
   03440 Homologous recombination
    I1A49_36220
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ssoi03032]
    I1A49_36220
   03400 DNA repair and recombination proteins [BR:ssoi03400]
    I1A49_36220
Enzymes [BR:ssoi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     I1A49_36220
DNA replication proteins [BR:ssoi03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     I1A49_36220
DNA repair and recombination proteins [BR:ssoi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     I1A49_36220
SSDB
Motif
Pfam: RNase_T DEDDh_C
Other DBs
NCBI-ProteinID: QPI59610
UniProt: A0ABX6WDS6
LinkDB
Position
complement(8758493..8759218)
AA seq 241 aa
MPSWFEGPLAAFDTETTGVDVEHDRIVSAALVVQRGTGSLPEVRRWLVSPGVPVPPAATE
IHGLTDAHLQQHGRWPAPVMDEVARAIADQISRGTPLVIMNAPFDLTLLDRELKRHRNSS
LAGYLSLRSMSVLDPRVLDKHLDRYRKGRRTLIDLCEHYGVELTGAHDAGADASAALHVV
RAVGRRFASRLETLTPAELHARQTVWYAAQARGLQAWFALNGSDEICDPAWPLRPDLPAA
A
NT seq 726 nt   +upstreamnt  +downstreamnt
atgccgtcctggttcgaagggccgctcgccgcctttgacacggagaccacgggtgtcgat
gtcgagcatgaccggatcgtatcggcggccctggtggtgcagcgcgggaccggaagtctc
cccgaagtccggcgctggctggtgagtccgggcgtgccggtgccgccggccgccaccgag
atacacggtctgaccgacgctcatctccagcagcacggcaggtggccggcgccggtgatg
gacgaggtggcgcgggcgatagcggaccagatctcgcggggcaccccgctggtgatcatg
aacgcgccgttcgatctgacgctgctggaccgggagttgaagcgacatcgcaactccagc
ctggcgggctatctttcgctgcgctcgatgagcgtgctggatccgcgcgtgctggacaaa
cacctggaccgctatcgcaagggccgccgcaccctgatcgatctgtgtgagcactacgga
gtggagctgacgggcgcgcatgacgcgggggcggacgcatcggccgcgctgcacgtggtg
cgggcggtggggcgccggttcgcctcacgcctcgagacgctgaccccggccgagctgcac
gcccgccagacggtctggtacgcggcgcaggcccgcgggcttcaggcgtggttcgcgctc
aacggctcggacgagatctgcgatccggcctggccgctgcgccccgacctgccggccgcc
gcctga

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