Streptomyces malaysiensis HNM0141: I1A49_38350
Help
Entry
I1A49_38350 CDS
T07406
Symbol
ligD
Name
(GenBank) non-homologous end-joining DNA ligase
Organism
ssoi
Streptomyces malaysiensis HNM0141
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QPI59979
LinkDB
All DBs
Position
complement(9292660..9293664)
Genome browser
AA seq
334 aa
AA seq
DB search
MGESVELTVGGRVVRVTSPGKVYFPERGFTKLDLARYYLAVGEGALRALRDRPTTLERYP
DGVEGESFFQKRAPKNLPEWIPTGRISFPSGRHADEICPTEPAAVVWAANLGSLTFHPWP
VRRGDTEHPDELRIDLDPQPGTDYGDAVRAAGELREVLDGLGLRGWPKTSGGRGLHIFVP
IVPEWTFTQVRRSAIAIARELERRAPERVTTKWWKEERGQKIFVDYNQTARDRTIASAYS
VRPRPHAPVSAPLRWDEVPDARPRDFDLATMPVRYRELGDVHADMDEHAFRLDAALELAA
RDEREHGLGDLPYPPEHPKMKGEPKRVQPSRAKK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgggagagtcggtggagctgacggtcggcggtcgcgtggtgcgggtgaccagccccggg
aaggtgtacttcccggagcgcgggttcaccaagctggatctcgcccgctactacctggcg
gtcggcgagggcgcgctgcgggcgctgcgggaccggccgacgacgctggagcgctatccg
gacggggtcgagggggagtcgttcttccagaagcgggccccgaagaacctcccggagtgg
attccgaccggccgtatctccttccccagcgggcggcacgcggacgagatctgcccgacc
gaaccggcggccgtggtgtgggcggccaatctgggcagcctgaccttccatccatggccg
gtgcggcgcggggacaccgaacaccccgacgagctgcggatcgacctcgacccgcagccg
ggcaccgactacggcgacgcggtccgggccgccggagagctgcgcgaggtgctggacggg
ctggggctgcgggggtggcccaagacctcgggcggccgggggctgcacatcttcgtcccg
atcgtgccggagtggaccttcacccaggtgcggcggtccgcgatcgcgatcgcacgggag
cttgagcggcgggctccggagcgggtgaccaccaagtggtggaaggaggagcgcggccag
aagatcttcgtggactacaaccagaccgcccgggaccgcaccatcgccagcgcctactcg
gtgcgcccccgcccccatgccccggtctccgcgccgctgcgctgggatgaggttcccgac
gcccggccgcgcgatttcgacctggccaccatgccggtgcgctaccgcgaactgggcgat
gtgcacgcggacatggacgagcacgccttccgcctggacgccgcgctggagctggccgcg
cgggacgagcgggagcacggcctgggcgacctcccgtatccgccggagcatccgaagatg
aagggcgagccgaagcgggtgcagcccagccgggccaagaagtga
DBGET
integrated database retrieval system
