Staphylococcus saprophyticus: SSP0763
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Entry
SSP0763 CDS
T00269
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
ssp
Staphylococcus saprophyticus
Pathway
ssp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSP0763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssp03021
]
SSP0763
03019 Messenger RNA biogenesis [BR:
ssp03019
]
SSP0763
Transcription machinery [BR:
ssp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SSP0763
Messenger RNA biogenesis [BR:
ssp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SSP0763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_25
Mor
AAA
TOM20_plant
Motif
Other DBs
NCBI-ProteinID:
BAE17908
UniProt:
Q49Z68
LinkDB
All DBs
Position
795044..796360
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AA seq
438 aa
AA seq
DB search
MPEKVRTSPQYESFHELYKNYTTKDLTQKAKSLKLTNYSKLNKKELVLAIMEAQMEKDGN
YYMEGILDDIQQDGYGFLRTVNYSKGEKDIYISASQIRRFEIKRGDKVTGKVRKPKDNEK
YYGLLQVDFVNDENAEEVKKRPHFQALTPLYPEERIVLETTKQNFSTRIMDLITPIGLGQ
RGLIVAPPKAGKTSLLKEIANAIAKNKPDAELFVLLVGERPEEVTDIERSVETAEVVHST
FDEPPQHHVKVAELLLERAKRLVEIGKDVIILMDSITRLARAYNLVIPPSGRTLSGGLDP
ASLHKPKAFFGAARNIEAGGSMTILATALVETGSRMDDMIYEEFKGTGNMELHLDRKLAE
RRVFPAIDIGRSSTRKEELLIDPKELDSLWQLRNMFTDSTDFTERFVRKLKRTDNNQEFF
EQLQKAAKESTKTGKPII
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaaagtacgaacatcacctcagtatgaatcgttccacgagttatacaaaaat
tacactacaaaagatctcactcaaaaagcaaaatctcttaagctaacaaactatagtaaa
ttgaataaaaaagaacttgttctcgcgattatggaagcgcaaatggaaaaagatggtaac
tattatatggaaggcattctagatgatatccaacaagatggttatggctttttaagaaca
gttaattattctaagggagaaaaagatatctatatctcagctagtcaaattcgtcgtttt
gaaattaaacgaggagataaagtgactggtaaggttagaaagccaaaggataatgaaaag
tattatggtttattacaggttgactttgttaatgatgagaatgcagaagaagtaaaaaaa
cgtcctcatttccaggcgttaacgccgttatatccagaagaaagaattgtgttagaaact
acaaagcagaatttttcaactcgaatcatggatttaatcacgccaattggattaggacaa
cgtggacttatcgttgcaccgcctaaagcagggaaaacctctttattaaaagaaattgca
aatgcaattgcaaagaataaacctgatgcagaattatttgtattattagtaggagaacga
ccagaagaggttactgatatagaaagatctgtagaaactgcagaagtagttcattctaca
tttgatgagccacctcaacaccatgtcaaagttgcagaattattattagaacgtgcgaaa
cgcttagttgaaattggtaaggatgtcattatactaatggattctataacaagattggca
cgtgcttataaccttgttattccgccaagtggtcgtacgttatctggtgggttagatcca
gcatctttacacaaaccaaaagcattctttggtgcagcaagaaatattgaagcgggtggc
agtatgactatattagctacagctttagttgaaactggttcgcgtatggatgacatgatt
tacgaagaatttaaaggtactggaaacatggagttacatttagatcgtaaattagcagaa
cgtcgagtatttccagcaattgatattggacgcagttcaacacgtaaagaagaattgctc
attgatcccaaagaactggattcattatggcaattacgcaatatgtttacagattcaacg
gactttacagaaagatttgttcgtaaactcaaacgaacagacaataaccaagaattcttt
gaacagttacaaaaagctgctaaagaaagcacaaaaacgggtaaaccaatcatttaa
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