Staphylococcus saprophyticus: SSP1064
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Entry
SSP1064 CDS
T00269
Name
(GenBank) DNA polymerase III alpha chain
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ssp
Staphylococcus saprophyticus
Pathway
ssp03030
DNA replication
ssp03430
Mismatch repair
ssp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSP1064
03430 Mismatch repair
SSP1064
03440 Homologous recombination
SSP1064
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssp03032
]
SSP1064
03400 DNA repair and recombination proteins [BR:
ssp03400
]
SSP1064
Enzymes [BR:
ssp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSP1064
DNA replication proteins [BR:
ssp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SSP1064
DNA repair and recombination proteins [BR:
ssp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SSP1064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAE18209
UniProt:
Q49YD2
LinkDB
All DBs
Position
1103048..1106251
Genome browser
AA seq
1067 aa
AA seq
DB search
MVAHLNIHTTYDLLNSSIRIKDVVAKAAQEGYTALAITDTNVLYGLPQFYDACIAANIHP
IFGMTINLTDGLSELETIVLAQNNLGLKDLFKLSSAIKMKEKVETPIEWLKKYESHFVII
FKNVTESHEAIISNFSEHAHVFVNHKSKVTFDLPIVWAQSTRYLNSQDSDTLSAMAAIKE
NSKLDLVSEQTDYNEHLYSNVELQGLSIDDAVWEQTNQLETLCQAEMIYHQSLLPKYKTP
NQQQSDAFLWQLLADNLQQLNLPLNKKELYQTRLEHEYQIITKMGFEDYFLIVSDLIQYA
KNNDVLVGPGRGSAAGSLVSYLLNITTIDPIEYNLLFERFLNPERVTMPDIDIDFEDTHR
DKVIQYVQEKYGETHVAGIVTFGHLLARAVARDVGRIMGFEEITLNEISKLIPHKLGITL
DDAYSQEPFKQFVHRNHRHERWFDICKKLEGLPRHTSTHAAGIIINDHPLYEYAPLTLGD
TGLLTQWTMTESERIGLLKIDFLGLRNLSIIHQIVKQVKHDLNIDVDIEQIPFDDENVFH
LLSQGDTTGIFQLESDGIRNVLKKLQPEHFEDIVAVTSLYRPGPMEEIPTYISRRHHPEK
VQYLHPDLEPILKTTYGVIIYQEQIMQIASKFANFSYGEADILRRAMSKKNRAVLESERQ
HFVNGALKNGYDENLSKQIFDLILKFADYGFARAHAVSYSKIAYIMSYLKVHYANYFYAN
ILSNAIGSEKKTAQMIDEAKHQKINILPPNINYSHWFYKATKKGIYLSIGAIKGVGYQSV
KLIVEERKANGFYKDFFDFTRRIPKRIKTRKLLESLILVGAFDTFGKNRATLLNAIDQVL
DDISDIEQDGFIFDVLTPKASYEEKEELPDHVLSEYEKEYLGFYVSTHPVEKAFEQKQYL
GIYKLANAQDNKPIFVQVDQFKRIRTKNGQNMAFVTLNDGINNLDGVVFPDTFKKYEIDL
NTSKMLVVRGKFENRNNKQQLILNQVDTMDHFEQTKFDEAQQVVVRKWDSESKLDQLLTN
DKGQNQIPVNYFDESQNNIETIGFITRDNEILSKLIQRLSPRDIRII
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggttgcgcatttaaatattcatacgacatatgatttattaaattcaagtattagaatt
aaggatgttgttgcgaaggctgcacaagaaggctatacagcgctcgcaattactgatacg
aatgttttgtatggacttccgcaattctatgacgcatgtattgctgcaaatattcatcca
atctttggtatgacaattaatcttacagatggtttgtcagagcttgaaacaatcgtattg
gcgcaaaataacttaggattaaaagatttatttaaactatcatcggcaattaaaatgaaa
gagaaagtagaaacaccgatagaatggttaaaaaaatatgaaagtcatttcgttattatt
tttaaaaatgtaactgaatctcatgaagcaattatttcaaacttttcggaacatgcgcac
gtctttgtaaatcataagagtaaagtcacttttgacttaccaatagtttgggcacaaagc
acgcgttatttaaattcccaagattcagatacgctttctgccatggccgcaataaaggag
aatagtaaattagatttagtgagtgaacaaacggattacaatgaacatctatattcaaat
gttgaattacaaggtttgtcaatcgatgatgcggtttgggaacaaacaaatcaactcgaa
acactttgtcaggcggaaatgatttatcatcaatctttgttaccaaaatataaaacacca
aatcaacagcaatcggatgcttttttatggcaattactagcagataatcttcagcaatta
aatttaccactaaacaaaaaggaactttatcaaacacgtttagagcatgaatatcaaatt
atcactaaaatgggttttgaagactactttttaatcgtaagtgatttaattcagtacgct
aagaacaatgatgtattagtcggtccaggacgtggatcagctgcaggttcacttgtaagt
tatttattaaatataacaacaatcgatcctattgaatataatctgttatttgaacgtttt
ttaaaccctgaacgtgtaacaatgccagatatagatattgattttgaagatacacataga
gataaagtcatccaatatgttcaagagaaatacggtgaaacccatgtcgctggtattgtg
acttttggtcatttgcttgcaagggcagtggctagggatgtggggagaattatggggttc
gaagaaatcacactaaatgaaatttctaaattaattccacataaacttggcataacatta
gacgacgcatattcacaggagccatttaaacagtttgttcatcgtaatcataggcatgaa
cgatggtttgatatttgtaagaaattagaagggttacctagacatacttcgactcatgca
gcaggtattattattaatgatcatccattatatgaatatgcaccattaacgctcggtgat
acaggtctattgactcaatggacaatgactgagtcagaaagaataggtttattaaaaata
gactttttaggtttgcgtaatctctcaatcattcatcaaatagtaaaacaagtgaaacat
gatttgaatatagatgtggatatagaacaaattccattcgatgacgaaaacgtatttcac
ttgttgtcacaaggggatacaacaggtatcttccaattagaatctgatggtattagaaat
gtattaaaaaaattacaacctgaacactttgaagatatagtcgctgtcacatcactttat
agaccagggccaatggaagaaattccgacctatatatcaagacgacatcatccagagaag
gtgcaatatttacatccagatttagaacctatattaaaaacgacctatggcgttattatt
tatcaggaacaaataatgcaaattgcgagtaaatttgccaattttagttatggtgaagcg
gatatcttaagacgtgcaatgagtaaaaagaacagagcggtattagaaagtgaaaggcaa
catttcgtgaatggcgctttgaaaaatgggtatgacgagaatttaagtaaacagattttt
gatttgattttaaaatttgcggattatggttttgctcgtgcgcatgccgtgagttattca
aaaattgcatacattatgagttatttaaaggtacattatgctaattatttttatgccaat
attttaagtaatgctattggaagcgaaaagaaaacagcgcaaatgattgatgaggctaaa
catcaaaaaattaatatattaccacctaatattaattacagtcattggttctacaaggcc
acaaaaaaaggtatctacctatctattggtgcaattaaaggtgtaggttatcaaagtgtt
aaattaattgtagaagaaagaaaagcaaatggtttctataaagacttttttgatttcacg
cgacggatacctaaacgaattaaaactagaaaattacttgaatctcttatcttagtgggg
gcatttgatacttttggcaagaatagagcgacgctgttaaatgctatagatcaagtgctg
gatgatatctctgatattgaacaagatggttttatttttgatgtactcacacctaaagct
tcttatgaagaaaaagaagagctaccagatcatgtgttaagtgaatatgagaaagaatat
ttagggttttatgtatctacacatccagtagaaaaagcatttgaacaaaagcaatatttg
ggtatttataagcttgctaacgcacaagataataaacccatttttgttcaagtagatcaa
tttaagcgtattagaacgaaaaatgggcaaaatatggcatttgtaactttaaatgatggt
atcaataatttggatggtgtcgtattcccggatacctttaaaaaatatgaaatcgattta
aatacttctaaaatgttagtcgtaagaggtaagtttgagaatagaaataataaacaacaa
ctgatattaaatcaagtggataccatggatcattttgagcaaactaaatttgacgaagcg
caacaagttgttgttcgaaaatgggatagtgaatctaaattggatcaattattaaccaac
gataaagggcaaaatcaaattccggttaactattttgatgaaagccaaaacaatatagaa
acaattggtttcataacacgagataatgaaatattaagtaaattaatccaacgtttatca
ccccgagatattagaattatttaa
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