Staphylococcus saprophyticus: SSP1075
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Entry
SSP1075 CDS
T00269
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ssp
Staphylococcus saprophyticus
Pathway
ssp03030
DNA replication
ssp03410
Base excision repair
ssp03420
Nucleotide excision repair
ssp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SSP1075
03410 Base excision repair
SSP1075
03420 Nucleotide excision repair
SSP1075
03440 Homologous recombination
SSP1075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssp03032
]
SSP1075
03400 DNA repair and recombination proteins [BR:
ssp03400
]
SSP1075
Enzymes [BR:
ssp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SSP1075
DNA replication proteins [BR:
ssp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
SSP1075
DNA repair and recombination proteins [BR:
ssp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
SSP1075
NER (nucleotide excision repair)
GGR (global genome repair) factors
SSP1075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
WHD_BrxR
SMI1_KNR4
Motif
Other DBs
NCBI-ProteinID:
BAE18220
UniProt:
Q49YC1
LinkDB
All DBs
Position
1120220..1122850
Genome browser
AA seq
876 aa
AA seq
DB search
MNKLILIDGNSLSFRAFYALPLLQNKAGIHTNAVYGFAMLLEKIIKEEQPTHFLVAFDAG
KTTFRHEQYSEYKGGRQKTPPELSEQFPYVRQLLDAYQIKRYELDNYEADDIIGTLSKQA
NAEKFETIIVTGDRDLTQLATDDVTIYYTKKGVTDVDHYTPEFIAEKYDGLVPNQIIDMK
GLMGDASDNIPGVAGVGEKTAIKLLKKFSTVENVYNHIEEVSGKKLKEKLENSKSDALMS
KELATINCDSPIEVTLADTKLPESPDSTAKIDIFKKLEFKQLLDQVDVEGTHTSAEELEL
EITSDFSNVDFNELSEATIHFELDGSNYLKDDILKFALYDGSNHVVIDADKVHDYPELIA
WLENDKTEKIVYDAKKSYIVAHRLDIAIKHIVFDVMLASYIIDPSRTIDDVNSVVSYFDQ
HYVKESIEVFGKGKKRHVPEDEILDHHVGTIIEAINKTKPKMEAQLEEYNQTNLLDDLEL
PLARILSEMEETGIYTVATDLQEMEKEIQAKLDVLINNIYNAAGESFNINSPKQLGVVLF
ETLELPVIKKTKTGYSTAVDVLEQLQGQHPIIDYILEYRTLSKLQSTYVEGLQKVISEDN
RIHTRFNQTLAQTGRLSSVDPNLQNIPIRLEEGRRIRKAFKSSDDNNVIFSADYSQIELR
VLAHITQDESMKQAFINDEDIHTATAMKVFNVQPDEVDSLMRRQAKAVNFGIVYGISDYG
LSQSLGITRKQAKQFIDDYLDSFPGVKQYMEDIVKDCKAQGYVETLLHRRRYIPDITSRN
FNLRGFAERTAMNTPIQGSAADIIKLAMVNFVNEVKHTDFHAQLLLQVHDELIFELPKDE
VEAFSEFIEEIMDNALALDVPLKVETSHGKTWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
ttgaataaattaatcttaattgatggtaacagtctgagctttagagctttttatgcttta
ccacttttacaaaataaggcaggtatacataccaatgctgtttatggctttgcgatgtta
cttgagaaaataattaaagaagaacagcctacacattttcttgttgcatttgatgcagga
aaaacaacatttagacatgaacaatatagtgaatataaaggtggacgtcaaaaaacacca
ccggaactaagtgaacaatttccatatgtcagacaattgttagatgcgtatcaaattaaa
cgatacgaattagacaattatgaagctgacgatattataggaacattaagtaaacaggca
aatgcagaaaaatttgaaacaataattgttacaggtgatcgagatttgacgcagttagct
acagatgatgtaacaatctattacacaaaaaaaggcgtaacagatgttgatcattatacg
cctgaatttattgctgaaaaatatgatggcttagtcccaaatcaaatcattgatatgaaa
ggattgatgggcgatgcatcagataatattcctggcgtggctggggttggtgaaaaaaca
gcaatcaagttattgaagaaattttctactgttgaaaatgtttataatcatattgaagaa
gtgtctggtaaaaaattaaaagaaaaactagaaaatagtaaatctgatgctttaatgagt
aaagaacttgctacaatcaactgcgatagccctatagaagtcactttagcagatacgaag
ttacctgaaagtcctgattcaacagcaaaaattgatatctttaaaaaacttgaatttaag
cagcttttagatcaagtcgatgtagagggcacgcatacttctgctgaagaattagaactt
gaaattacatcggattttagtaatgtagattttaatgaattatcagaagccactattcat
tttgaattagatggatcgaattatttgaaagatgatattttgaaatttgctttatatgat
ggatcaaatcatgttgtcattgatgcggataaggttcatgactatccggaattgatagct
tggttagaaaatgataagacagaaaaaatcgtctatgatgctaaaaaatcatatattgtt
gcacatcgcttagacatagctattaaacatatcgtttttgatgttatgctcgcgagttat
attatcgatccatctcgcacaattgatgatgtgaattctgtggtttcgtattttgatcaa
cattatgtgaaagaaagtatagaagtttttggtaaaggtaaaaaaagacatgtacctgag
gatgaaattttagatcatcacgttggaacgattatcgaagcaattaacaaaactaaacca
aaaatggaagcgcagttagaagaatataatcaaactaacttattagatgatttagaatta
ccgttagcacgtattttaagtgaaatggaagaaactggcatttacacagtagcaaccgat
ttgcaagaaatggaaaaagaaattcaagcgaaacttgatgtactaattaataatatttat
aacgcggctggcgaatcatttaatattaactcaccaaaacaattaggcgtggtactattt
gaaacattagaattacctgttattaaaaaaactaaaacaggttattctacggccgtagat
gtactggagcaactacaaggacaacatcctattatcgactatattttagagtacagaaca
ttatcaaaactacaatctacttatgtagaaggactgcaaaaagtgattagtgaagataat
cgcattcatacgcgttttaatcaaacacttgcacaaacgggtagattgtcatctgtagat
cctaacttgcaaaatattccaattcgcttagaagaaggtcgaagaattagaaaggcattt
aaatctagtgacgataacaatgtcatcttctcagctgactattcgcaaattgaattacgt
gtacttgcacatattactcaagatgagagcatgaaacaagcattcatcaatgatgaagat
attcatacagcaactgctatgaaagtatttaatgtacagccagatgaagttgatagtcta
atgcgtagacaagcgaaagcagtaaatttcggtatcgtatatggcataagcgactatggg
ttaagtcaaagtttaggtattacacgtaaacaagcaaagcagtttattgatgattatctc
gatagtttccctggtgtgaaacaatatatggaagatattgttaaagattgtaaagcgcaa
ggttatgttgagacactattacatcgccgtcgttatattccggacatcactagtagaaac
tttaatttacgtggttttgcggaaagaacggctatgaatacaccgatacaaggcagtgcc
gcagatattatcaaattggcaatggttaattttgtaaatgaagttaaacatactgatttt
catgcgcaattattattacaagtacacgatgaattaatttttgaattacctaaagatgaa
gtagaggcttttagtgaatttatagaagaaataatggataatgcattggcattagacgta
ccactcaaagttgaaacaagtcatggtaagacatggtatgacgcaaaatag
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