Staphylococcus saprophyticus: SSP1142
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Entry
SSP1142 CDS
T00269
Name
(GenBank) ATP-dependent exonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ssp
Staphylococcus saprophyticus
Pathway
ssp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SSP1142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssp03400
]
SSP1142
Enzymes [BR:
ssp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SSP1142
DNA repair and recombination proteins [BR:
ssp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SSP1142
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
AAA_22
AAA
nSTAND3
AAA_12
Rad17
AAA_14
NPHP3_N
T2SSE
RPW8
TsaE
AAA_16
NB-ARC
AAA_18
DUF815
AAA_28
AAA_29
ABC_tran
Mg_chelatase
SLFN-g3_helicase
RsgA_GTPase
AAA_17
UvrD_C
Zeta_toxin
DUF3297
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BAE18287
UniProt:
Q49Y57
LinkDB
All DBs
Position
1188933..1191317
Genome browser
AA seq
794 aa
AA seq
DB search
MGDPTLFNNSMIKGTVDAILFQNKENFYTVLKVDTIESSETFDSMPTIVGFFPEIAEGDV
YTFKGQVVTHPKYGKQLKAETFEKELPQTKEAIISYLSSDLFKGIGKKTAQSIVNKLGEN
AINDILNDPSVLEQVPGLPKKKQKQIAEQIASNQETEQIIIRLHDLGFGPKLAMAIYQAY
LGETLNVVENKPYQLVYDVKGIGFNKADTLARNVGIQFNDTERLKAGLLYVLEEECIKQG
HTYLPTQNVLEMTQDMLSQAPSEIIEMQQLNHVLQELVNDTKLIQQENEVAIPSLYYSEL
KSVQNLYRNYAYKNKLKQIEQSDLLMKIGEIEERNQVNYANSQKDALQTAINSKIMLLTG
GPGTGKTTVIKGIVELYAEIHGLSLNYDDYQNDDYPVVLGAPTGRASKRLAESTGLEAMT
IHRLIGWNQDTQPEDILDNEISAKLIIIDEMSMVDTWLFHQFLSAVPIDAQIILVGDEDQ
LPSVGPGQVFKDLIDSKVIPRVNLTEVYRQQDGSSIIELAHRMKLGEPIDITQRFHDRNF
INCNTDQIPTVVEKVVSSAVNKGYDMSDIQVLAPMYKGSAGIKKLNMVLQDILNPKDKDT
REIEFGDVFFRKGDKVLQLVNRPNDNIFNGDIGVIVGVFWAKENALNKDVLVVDFEGNEI
TFVRQDLIELTHAYCTSIHKSQGSEFPIVIMPMVKQYFRMLQKPILYTGLTRAKQSLVFL
GDPQAFDIGLKTHGQVRMTQLCTFLKAYFNNDASTEEEISDTFDADIILTEDNIFKINPM
INMGDISPYDFVED
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccctacactatttaataattcaatgattaaaggaaccgttgatgcgatttta
tttcaaaataaagaaaatttttatacggttttaaaagttgatacaattgagtcaagtgaa
acatttgattcaatgcctacgattgtagggtttttcccagaaattgctgaaggtgatgtt
tatacattcaaaggccaagttgttacacatccgaagtatggtaaacaacttaaagctgaa
acgtttgaaaaagaattaccacaaactaaagaggcaattattagttatttatcaagtgat
ttatttaaaggtattggtaaaaaaactgcgcaaagtattgttaataaactaggtgaaaat
gctataaacgatatcttaaatgacccgtcggtattagagcaagtacctggtttacctaag
aaaaagcaaaaacaaatagctgaacaaattgctagtaatcaagagacggagcaaattatc
atacgcttacatgatttagggtttggaccaaaactagctatggcgatttaccaagcgtat
ttaggagaaacacttaatgttgttgaaaataaaccctaccaactcgtatatgatgtaaaa
ggaattggatttaataaagctgataccttagcacgtaatgttggaatccagttcaatgat
acagaaagactaaaagcgggtttgttatatgtacttgaagaggaatgtattaagcaagga
catacatatttacctactcaaaatgtattagaaatgactcaagatatgctttctcaagca
cctagtgaaataatagaaatgcaacaattgaatcatgtattacaagaattggtaaatgat
accaaactcattcaacaagaaaatgaagttgcaattccgagtttatattattcagaatta
aaaagtgtgcagaatctttatcgcaattatgcgtataagaataaactcaaacaaatagaa
cagtctgatcttttaatgaagattggagaaattgaagagcgcaatcaagttaattatgca
aattcacaaaaagatgcgttacagactgctattaattctaaaattatgctgctcacaggt
ggccctggtacaggtaaaacaactgtgataaaaggtattgtagaattatatgcagaaatt
catggtctctcattaaattatgatgattatcaaaatgatgattatccagtcgtattaggt
gcgcctacaggaagagcttcaaagcgtttggcagagtcgacaggtttagaagccatgaca
attcatcgcttaatcggatggaatcaggatacacaaccggaagatattttagataatgaa
atatcagcaaaattaattatcattgatgagatgtctatggttgatacttggctgtttcac
caatttttaagtgcagttccaatagatgcacaaatcattttagtaggtgatgaagatcaa
ttgccttctgtaggtcctggtcaagtatttaaagatttaattgattcaaaagtgatacct
cgtgttaatttaacagaagtttatagacaacaagatggttctagtattattgaattagcg
catcggatgaaactaggtgaaccgattgatataacccaacgttttcatgatcgaaatttt
ataaattgtaatacagatcagattccgacagttgtggaaaaagttgtttcaagcgctgtg
aataaaggctatgatatgagtgacattcaagtgcttgcaccaatgtataaagggtcagca
ggcattaaaaaacttaatatggtattacaagatattttaaatcctaaggataaagataca
cgtgaaatagaatttggtgatgtgttttttagaaaaggtgacaaagtcttgcaacttgta
aataggcctaatgataatattttcaacggtgatattggtgtaatcgtgggtgttttttgg
gcaaaagaaaatgcgttgaacaaagatgtattagtcgttgattttgaaggtaatgaaatt
acttttgttcgtcaagatttaatagaattaactcatgcttattgtacgtcgatccataaa
tcacaaggttctgaattcccaatagtcatcatgcctatggtaaaacaatactttagaatg
ctacaaaagcccatattatatactggcttaacaagggctaaacaatcccttgtcttttta
ggtgatccgcaagcctttgatattggtttaaaaacgcatggacaagtgagaatgacacag
ttatgcacatttttaaaagcctactttaataacgatgcatctactgaagaagaaatcagc
gacacatttgatgctgatatcattctaactgaagacaatatttttaaaattaacccaatg
attaatatgggagatatttccccatatgacttcgttgaagattga
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