Staphylococcus saprophyticus: SSP1195
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Entry
SSP1195 CDS
T00269
Name
(GenBank) RNA polymerase sigma factor A
KO
K03086
RNA polymerase primary sigma factor
Organism
ssp
Staphylococcus saprophyticus
Pathway
ssp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SSP1195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssp03021
]
SSP1195
Transcription machinery [BR:
ssp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SSP1195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
BAE18340
UniProt:
Q49Y04
LinkDB
All DBs
Position
1239366..1240472
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AA seq
368 aa
AA seq
DB search
MSGNNVKVKKQTIDPSLTLEDVKKQLIEKGKKEGHLSHEEIAEKLQNFEMDSDQMDELFD
QLTDNDISLVNEKDSSDKDSKLNPNDLSAPPGVKINDPVRMYLKEIGRVNLLNAQEEIEL
AKKIEQGDEVAKSRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFDFNKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGRDPAPEEIG
EEMDLPPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQEAQSPSDHAAYELLKEQL
EDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRS
KRLKDFMD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaataacgttaaagttaaaaaacaaacgattgatccatctctaactttagaa
gatgtaaaaaaacaattaattgaaaaaggtaaaaaagaagggcaccttagtcatgaagaa
attgcagaaaaactgcaaaatttcgaaatggattctgatcaaatggacgaattatttgat
caattaactgataatgacataagtttagttaatgaaaaagatagttcagataaagattcc
aaattaaatccaaatgatttaagtgcacctccaggcgtaaaaataaatgatccagtgcgt
atgtatttaaaagaaatcggacgagtaaatttattaaacgctcaagaagaaattgaattg
gcgaaaaaaattgagcagggcgatgaagttgcgaaatctcgattagctgaagccaattta
cgacttgtagttagtattgctaaaagatatgtaggtcgtggcatgcttttccttgacctt
attcaagaaggtaatatgggtttaatcaaagcagtagaaaagttcgattttaataaagga
tttaaattttcaacttatgcaacttggtggattcgtcaagcaatcactcgtgcgattgct
gaccaagcacgtacaattcgtataccggtacacatggtagaaacaattaacaaattaatt
cgtgttcaaagacaattattacaagatttaggtagagatcctgcacctgaagaaataggg
gaagaaatggatttaccaccagaaaaagtaagagaaatcttaaaaattgctcaagaacct
gtatcacttgaaacaccaattggtgaagaagatgatagtcatttaggtgattttattgag
gaccaagaggctcaaagtccttctgatcatgcggcctatgaattgttaaaagaacaatta
gaagatgtcttagatacattgacggaccgtgaagaaaatgtactacgcttacgttttggt
ttggatgatggacgtacgcgcacattagaagaagtaggtaaagtatttggcgttactaga
gaacgtattcgtcaaatagaagcaaaagcgcttagaaaactaagacacccaagcagaagt
aaacgtctaaaagactttatggactaa
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