Staphylococcus saprophyticus: SSP1198
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Entry
SSP1198 CDS
T00269
Name
(GenBank) putative helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
ssp
Staphylococcus saprophyticus
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssp03019
]
SSP1198
03009 Ribosome biogenesis [BR:
ssp03009
]
SSP1198
Enzymes [BR:
ssp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SSP1198
Messenger RNA biogenesis [BR:
ssp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SSP1198
Ribosome biogenesis [BR:
ssp03009
]
Prokaryotic type
rRNA helicases
SSP1198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAE18343
UniProt:
Q49Y01
LinkDB
All DBs
Position
1242795..1244135
Genome browser
AA seq
446 aa
AA seq
DB search
MANHPFEKFNLEAGLIDAVKDLNFNQPTEIQTRVIPKIIKQVNLIGQSQTGTGKSHAFLL
PLLNSIDTDYKEPQAIVVAPTRELAQQLFDVASHLTRFKEDVSVKLFIGGTDIEKDRSRV
KNQPQLIIGTPTRINDLAKHGDLHVHLASYLVIDEADLMIDLGLIDEVDYVATRLDENAH
IAVFSATIPKSLHPFLNKYLENPEFVEIENTEKNKKNIEFYLIPTKGEAKIEKTLKLIDI
LNPYLCIIFCNSRDSADELAKQLNAAGLKLGMIHGGLTPRERKQQMKRIRNLEFQFVIAS
DLASRGIDIDGVSHVINFDVPNDIDFFTHRVGRTGRGQYKGVAITLYSPDEEHNIALIEQ
RGYKFENVDIKDDELKPIKAHNMRQTRKNKDDHLTNQLKYKVKTNKKKVKPGYKKKFKRD
LDDLKRKERKQFSKQKSRQDRKNRKG
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcacccatttgaaaaatttaatttagaagcaggtcttatagatgctgtgaaa
gatttgaattttaatcaaccgactgaaatacagacacgtgtcataccaaagataattaaa
caagtgaatttaattggtcaatcacaaacaggcacaggaaaatcacatgcgtttttatta
ccattattaaattcaatcgatacagactataaagaaccacaagcaatagttgttgcacca
acacgtgaactagcacaacaactatttgatgtagcaagtcatttaacaagattcaaagaa
gacgtatctgtaaaactcttcattggcggcacagatatcgaaaaagatcgtagccgagtt
aagaaccaaccgcaacttatcataggcacaccaactcgaattaacgatttagctaaacat
ggggatttacatgtacacttagcttcttatttggtgattgatgaagcagatttaatgatt
gatttaggactaatagatgaagtggattacgtagcaacaagactagatgaaaatgcacat
attgcagtatttagtgcaactattcctaagtcattgcacccatttttaaataaatattta
gaaaatccagaatttgtagaaattgaaaacacagaaaaaaataagaaaaatatcgaattt
tatttaatacctacaaaaggtgaagcaaaaatagaaaaaacactaaaactgatcgatata
ttaaatccatatttatgtattatattctgtaacagtagagatagtgcagatgaattagca
aaacaattaaatgctgctggtttaaaattagggatgattcacggtggtcttacacctaga
gaacgtaaacaacaaatgaaaagaattagaaatttagaattccaatttgtgattgcaagt
gatttagcttcacgtggtatagatattgacggtgtaagccatgtaattaacttcgatgtg
cctaatgatattgatttctttacacatagagttggacgtacaggacgtggtcaatacaaa
ggtgtagcaattacattgtacagtcctgatgaagagcataatattgcattaattgagcaa
agaggttataaattcgaaaatgtagatatcaaagacgatgaattaaaaccaataaaagcg
cataatatgcgacaaacgcgtaaaaataaagacgatcacttaacaaatcaattgaaatat
aaagttaaaacgaataagaaaaaagtaaagccaggctataagaaaaaattcaaaagagat
ttagatgatttaaaacgtaaggaacgtaaacaatttagtaaacagaaaagtcgtcaagat
agaaaaaatagaaaaggatag
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