Staphylococcus saprophyticus: SSP1231
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Entry
SSP1231 CDS
T00269
Name
(GenBank) exodeoxyribonuclease large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
ssp
Staphylococcus saprophyticus
Pathway
ssp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SSP1231
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssp03400
]
SSP1231
Enzymes [BR:
ssp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SSP1231
DNA repair and recombination proteins [BR:
ssp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SSP1231
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
BAE18376
UniProt:
Q49XW8
LinkDB
All DBs
Position
1270413..1271750
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AA seq
445 aa
AA seq
DB search
MSEYLSVTSLTKYIKYKFDQDPHLQSVLIKGELSNFKKHSSGHLYFNVKDKNSVISAMMF
KGNASKIDFEPKEGDEVLLEARVSVYERRGNYQIYVNKMHMDGIGNLYQKLEQLKKKLTK
EGFFDQNHKKVIPKFPQKIAVLTAGTGAAIRDIHTTINSRYPLAEQVQINTLVQGEQAKS
DIIEKINQADALNVDTIIIGRGGGSIEDLWNFNEEDVVKAIYNCQTPIISAVGHETDFTL
SDFVADVRAATPTQAAVMATPDQYELRQYLQQANLSLTRFIKQYMQQKRKHLEHVASYYK
FQTPSLLYDQQIQKRDDLEKQLKLSLNLKIKNQQQQLQLLFNNFNLKTFKQRIKRDQLTN
NQKRVELSKVMHNLLDNQKNNLARKLENLNNLSPTNTMLRGYTIVNKDDKVITSTKDLAE
NDNIVLTMKDGVVDAQVKKVRCNDE
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatatttaagtgtaacttcgttaactaaatatattaaatataaatttgatcaa
gatcctcatttacaatccgtattgattaaaggcgaattatctaattttaaaaagcatagt
agtggacatctgtattttaatgtaaaagataaaaacagtgtcatcagtgcaatgatgttt
aaaggaaatgcatcaaaaattgattttgaacctaaagaaggggacgaagtgctattagaa
gcacgtgtttctgtctatgaacgtcgtggtaattatcaaatatatgttaataaaatgcat
atggatggaataggtaatctttatcaaaaattagagcagttaaaaaagaaattaactaaa
gaaggcttttttgatcaaaatcataagaaagtgatacctaaattcccccaaaaaatagct
gtgctaacagccggaactggcgctgcaatacgagatattcatacgactattaatagtagg
tatccgttagcagaacaagttcagatcaatacacttgttcaaggagaacaagctaaaagc
gacattattgaaaaaattaatcaagctgatgctttgaatgttgatacaattattatcggt
cgtggcggaggctctatcgaggatttatggaatttcaatgaagaagatgtcgttaaagcc
atctataattgtcaaacaccgattatttccgcagtaggacatgaaactgattttacatta
agtgattttgtggcagatgtaagagcagcaacaccaactcaagcagcagtaatggctacg
ccggaccaatatgaattacgtcaatatttacagcaagctaatttatcattgactcgattt
atcaaacaatatatgcagcaaaaacgaaaacatttggaacatgttgcatcttattataaa
ttccaaacgccttcactactttatgatcaacaaatacaaaaacgtgatgatcttgagaaa
caacttaagttgtctttgaatttgaaaattaaaaatcagcaacaacaattacagttactc
tttaacaatttcaatttaaaaacgtttaaacaacgtattaaaagagaccaattaacaaat
aatcaaaaacgtgttgaattaagtaaagtcatgcataatttacttgataatcaaaaaaac
aatcttgctagaaaactagaaaatcttaataatttaagtcctactaatactatgttgcgt
ggttatacaatcgtaaataaggatgataaagttattaccagtacgaaagacttggctgaa
aatgataatattgtgttaacaatgaaagatggcgttgttgatgcacaagtaaagaaagta
aggtgtaatgatgagtaa
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