Staphylococcus saprophyticus: SSP1411
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Entry
SSP1411 CDS
T00269
Name
(GenBank) putative exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
ssp
Staphylococcus saprophyticus
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssp03400
]
SSP1411
DNA repair and recombination proteins [BR:
ssp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SSP1411
Archaeal homologous recombinant proteins
SSP1411
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
PUMA_CC
DUF7365
nSTAND_NTPase5
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BAE18556
UniProt:
Q49XE1
LinkDB
All DBs
Position
complement(1461138..1464167)
Genome browser
AA seq
1009 aa
AA seq
DB search
MRPIKLNLTNFGPFLNETIDFNNVENNQLFLISGKTGSGKTMIFDAIVFALFGEASTKDR
KESDLRSHFAESKKPMVVEFEFKLRNQYFKIQRQGAFIKEGNKNKTLGQLAVYQYEQDDY
ALRESKINSGNQFIKALLGVNAEQFRQLFILPQGEFKRFLLSKSVEKQDILRTLFNSQRF
EEIQKKLSDDVKEVREQIEKRYNDLENHWKELETFDDETLCEHKVISARQTNNIIKVLPD
FKMKAQIIRDDFEQKKEILKNKVNSTENALNNNIKLEDALNKLNENQQKYEALLVNENEI
QEKVKRVTEINEVRPITNLLEVKENTISKKGKVAQSIEEKSKSIFDLEDKIKQSNLEADN
LKEKQDDIEELRRFIEQTQLFFEKANKYKDAYNNYQFTKTAFTDLEAHLTQKNEEIKDTT
AKLNQRQPDYRKIEQITEAIYNLNNDIKQLKQNEKDKIEYDALEKRKMQKQRNLKDLSQK
RVQLNEEYNNIDKSKLDLNNKQDVIATVQAALHTGETCPICGNEIHTLSSHVDFDEIMER
HQQLTLLEEKIATVKGDIIKCESELSHIEEQLSKYTIASLENINYEALEDEVEKKYQEKK
KIDEENNEIEKLKDQLQQYEKSSHDLQMNIQKKEHILKENETAINDFENTTGYKRVDEFL
TKFEDAYNQIRQFDQTLNEIEQKIQNYKSTLAIEKNSVTYLKNNLAEIETEINETDMKIN
EEMQRIGFTSIEQVEKVTAQASEKQNLEKEIETFKKEKQSYELYIAQLKAETNNKKLDDT
QQLKERFEEMQQVYETASTELSQHDYKMEFNSKKITEINKIIDELNSELQSQQEVFQLAE
ILAGKNEQKLTLENYVLIYYLERILTQANQRLAIMTGQRYQLTRRAQISQGYSGLEIDVF
DAHSNQSRHITSLSGGETFQASLALALGLSEIVQQESGGISLDSMFVDEGFGTLDQETLE
TALDTLLSLKSTGRMVGIISHVSELKQRIPLILEVTTEQYQSTTHFKKQ
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgagacccattaaactgaatttaactaatttcggtccctttttaaatgaaacaattgat
tttaataatgtagaaaataaccaactctttttaatcagtggaaaaactggttcaggcaag
acgatgatatttgatgctattgtgtttgcattatttggtgaagcttccacaaaagataga
aaagaaagcgatttaaggagtcattttgctgaaagtaaaaaaccaatggttgtcgaattt
gaatttaaattaagaaatcaatattttaaaattcaaagacaaggtgcatttataaaggaa
ggtaataaaaataaaacactagggcaactagcagtttatcaatatgaacaagatgattat
gcacttagagaaagtaaaattaatagtggtaatcaatttatcaaagcgctactaggtgtg
aatgctgaacaatttcgacaactgtttatattaccacagggtgaatttaaacgattttta
ctctcgaaaagtgtggaaaaacaagatatattaagaacactgtttaacagtcagagattt
gaagaaattcaaaaaaaattatctgatgatgtaaaagaagtaagagagcaaatagaaaaa
aggtacaacgatttagaaaatcattggaaagaattggaaacttttgatgatgaaacatta
tgcgagcataaagtaataagtgctagacaaacgaacaatatcattaaggtattaccagat
tttaaaatgaaagcacaaataatacgagatgactttgaacagaaaaaagaaatattaaaa
aataaagtcaacagtacagaaaatgctttaaataataatattaaattagaggatgcttta
aataagctcaatgaaaatcaacaaaaatatgaagcattattagttaatgaaaacgaaatc
caagaaaaagttaagcgtgtaacagaaatcaacgaagtaagacccattacgaatttatta
gaagtaaaagaaaatacaatttccaaaaaaggtaaagtagcgcaaagtattgaagaaaaa
tctaaaagtatctttgatttggaggataagataaaacaaagtaaccttgaagcggataac
cttaaagagaagcaagatgatattgaggaactaaggcgttttattgaacagacgcaattg
ttttttgaaaaagcaaataaatataaagatgcctacaacaattatcagttcacgaaaaca
gcatttacagatttagaagcgcatttaactcaaaaaaatgaggaaatcaaagatactaca
gctaaattaaatcaacgtcagcctgattatcgaaagatagaacaaattacggaagcaata
tacaaccttaataatgatattaaacaattgaagcaaaatgaaaaagataaaattgagtat
gatgcattagagaaaagaaaaatgcaaaagcaacgtaatcttaaagatttaagtcaaaag
cgtgtgcaactcaatgaggaatataataatattgataaatctaaattagatttaaacaac
aaacaagatgtaattgcaacagtacaagcagctctacatactggtgaaacttgcccaatc
tgtggtaatgaaattcatacattatcgagtcacgtggattttgatgaaataatggaaaga
catcaacagctcacgctattagaagaaaaaatagctactgtaaaaggagatattattaaa
tgtgaaagtgaattgtcacacattgaggagcaattatcaaaatatactatagcttcattg
gaaaatataaattatgaagctctagaagatgaagttgagaagaaatatcaagaaaagaaa
aaaatagatgaagaaaataatgaaatagaaaaattaaaagaccaattacaacaatatgaa
aaaagttcacacgatttacagatgaatattcaaaaaaaagaacacatattaaaagaaaat
gaaactgcgataaacgattttgaaaatacaacaggttataaacgggttgatgaattttta
acaaaatttgaagatgcttataatcaaatacgccaatttgatcaaacgctaaatgaaatt
gaacaaaaaatacaaaattataagagtactttagcaatagaaaaaaatagtgtaacttat
ttaaaaaataaccttgctgaaatagaaactgaaatcaatgagactgatatgaaaatcaat
gaggaaatgcaacgtattggttttacatcaatagaacaagttgaaaaagtaacagcacaa
gcatcagaaaagcaaaatttagaaaaagaaattgaaactttcaaaaaagagaaacaatct
tacgaattatatatagcgcaactaaaagctgaaacaaataataagaagctagatgataca
caacaactaaaagaacgatttgaagaaatgcaacaagtatatgaaacagcttcaactgaa
ttaagtcaacatgactataaaatggagtttaattctaaaaaaataactgaaataaataaa
attatagatgagttaaatagtgaattgcaatctcaacaagaagtatttcaattagcagaa
attttagcagggaaaaatgaacaaaaattaacgttggaaaattatgtattaatatattac
ttggagcgtattcttactcaagctaatcagcgcttagcaattatgacgggacagagatac
caattaacgagacgagctcaaatatctcaaggctatagtggactagaaatagatgtgttc
gatgcacattcaaatcaatcacgccacattacatcgttatctggtggagaaacatttcag
gcatcattagcattagcattgggattaagtgaaattgtgcaacaagaatcaggtgggatt
tcacttgattcaatgtttgtagatgaaggatttggtactttagatcaggaaacactagaa
actgcactagatacattgctaagtttaaaatcaacgggtcgcatggttgggattatttct
cacgtaagtgaactcaagcaaagaataccgcttatattggaagtaaccacagaacagtat
caaagtacaacacattttaaaaaacaatag
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