Staphylococcus saprophyticus: SSP1479
Help
Entry
SSP1479 CDS
T00269
Name
(GenBank) putative hydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ssp
Staphylococcus saprophyticus
Pathway
ssp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ssp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SSP1479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ssp03019
]
SSP1479
Messenger RNA biogenesis [BR:
ssp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SSP1479
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
BAE18624
UniProt:
Q49X74
LinkDB
All DBs
Position
complement(1530119..1531678)
Genome browser
AA seq
519 aa
AA seq
DB search
MNLLGLLLILLGIILGVVVGYIVARNLLHQKQLQAGQTAEDIIEQGNKEAENIKKEKLLE
AKEENQIIKEQSEIELRERRGDLQKQEARLLQKEENLERKSDLLDKKDEILEQKESKLEE
RQQQVDAKESSVQTLINKHEQELERISGLTQAEAAQEQLQRVEDELSQDIAILVKEKERE
AKEAVDKNAKELLATTVQRLAAEHTSESTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRREIARTALVNLVSDGRIHPGRIEDMVDKARKEVDDIIRD
AGEQATFEINVHNMHPDLVKILGRLQYRTSYGQNVLKHSIEVAHLSGMLAAELGEDITLA
KRAGLLHDVGKAIDHEVEGSHVEIGVELAKKYAENETVINAIHSHHGDVEPTSIISILVA
AADALSAARPGARKETLENYIRRLERLETLSESYEGVEKAFAIQAGREIRVIVSPDTIDD
LKSHRLARDIKSQIEDELQYPGHIKVTVVRETRAIEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgaatttattaggcctcctactcattttgctaggtattattctcggagttgttgtaggg
tatattgttgcccgaaatttgttgcatcaaaagcaattacaagcaggacaaactgccgaa
gatattatcgaacaaggtaataaagaagcagagaatattaagaaggaaaagctcctagaa
gctaaagaagaaaatcaaatcataaaagagcaaagtgaaattgaacttcgtgaaagacgt
ggtgatcttcaaaagcaggaagcaagacttctacaaaaagaagaaaacttagagcgaaaa
tctgatctattagataaaaaagatgagattttagagcaaaaagagtctaaacttgaagaa
cgacaacaacaagtagatgcaaaagagagtagtgttcaaacattaataaataagcatgaa
caagaattagaacgcatctctggtctcactcaagcagaagctgcacaagagcaacttcaa
agagttgaagatgaattgtcacaagatattgcaatacttgttaaggaaaaagagagagaa
gcaaaagaagcagtcgataaaaatgcaaaagaactattagcaactactgttcaaaggtta
gctgcagagcatacttctgaatctacagtttctgttgttaatttaccgaatgacgaaatg
aaaggtcgaatcattggtagagaaggtagaaatatcagaacgttagaaacgttaactggt
attgacttaattatagatgatacaccagaagccgtaattctttctggttttgacccaatt
agacgtgaaattgcaagaactgcattagtaaatcttgtttcggatggtcgaatccatcct
ggacgaattgaagatatggtagacaaagctcgaaaagaagtagacgacattattagagat
gcaggggaacaagctacatttgaaataaatgtacataacatgcatccagatcttgttaag
atcttaggtcgtttacagtatcgtactagctatggacaaaatgtattgaaacattctatc
gaagttgctcacttaagtggtatgttagcagcagaattaggtgaggatattacattagct
aaacgtgctggcttacttcatgatgttggtaaagctattgatcacgaagtagaaggtagc
catgttgaaatcggtgtagaattagcgaaaaaatacgctgaaaatgaaacagtcattaat
gcaatacattcccatcatggtgatgttgaaccaacttcaattatttctatcttggttgct
gcagcagatgcactttcagctgcgagaccgggtgctcgtaaagagactttagaaaattat
attagaagattggaaagattagaaacactatctgaaagttatgaaggtgttgagaaagca
ttcgcaatccaagcaggtagagaaattcgagttattgtatcaccagatactatcgacgac
ttaaaatcacatcgcttagcaagagatattaagagccaaattgaagatgaacttcaatat
ccaggtcatataaaagtgacagttgttcgtgagactagagcaattgaatatgcaaaataa
DBGET
integrated database retrieval system