Shewanella spartinae: K0I31_00095
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Entry
K0I31_00095 CDS
T09209
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sspa
Shewanella spartinae
Pathway
sspa00071
Fatty acid degradation
sspa00280
Valine, leucine and isoleucine degradation
sspa00310
Lysine degradation
sspa00362
Benzoate degradation
sspa00380
Tryptophan metabolism
sspa00410
beta-Alanine metabolism
sspa00640
Propanoate metabolism
sspa00650
Butanoate metabolism
sspa00907
Pinene, camphor and geraniol degradation
sspa00930
Caprolactam degradation
sspa01100
Metabolic pathways
sspa01110
Biosynthesis of secondary metabolites
sspa01120
Microbial metabolism in diverse environments
sspa01200
Carbon metabolism
sspa01212
Fatty acid metabolism
Module
sspa_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K0I31_00095 (fadB)
00650 Butanoate metabolism
K0I31_00095 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K0I31_00095 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K0I31_00095 (fadB)
00310 Lysine degradation
K0I31_00095 (fadB)
00380 Tryptophan metabolism
K0I31_00095 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K0I31_00095 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K0I31_00095 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K0I31_00095 (fadB)
00930 Caprolactam degradation
K0I31_00095 (fadB)
Enzymes [BR:
sspa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K0I31_00095 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K0I31_00095 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K0I31_00095 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K0I31_00095 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
QYJ93850
LinkDB
All DBs
Position
complement(20950..23100)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIARLCFNAEGSVNKFDRETLNSLNDALDALAQTQGVKGLMLTSG
KDAFIVGADITEFLGLFAQDDNVLQGWLEDANKVFNKLEDLPFPTISAIKGFALGGGCET
ILATDLRIADTSARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEAALK
VGAIDAVVAPELLETAARQMLQDAISEKIDWQARRQRKLSPLTLPKLEAMMSFATAKGMV
FKVAGKHYPAPMAVVEVIEKAALSERAEALQVEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAAKQAQAVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDINQAALDLGLNEAAKLL
TAQINRGRSTPAKMAGVLNNITATLDYNALKQADVVVEAVVEHPKVKATVLAEVEQVVGE
DAIITSNTSTISINLLAKSLQKPERFCGMHFFNPVHKMPLVEVIRGEHSAEETVASVVAY
AAKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLEDGADFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMAKEGKDAIDVMFEAERFGQKNGKGFYQYSVDRRGKP
KKEVDPLSYELLGNAFGEQKEFSSDEIIARTMIPMIIETVRCLEEGIIATPAEADMGLVY
GLGFPPFRGGVFRYLDTLGVANFVALADQYAHLGGLYQVTDKMRELAATNGSYYLA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacgattcaagtggaattacttgaagacaatatcgctcggctc
tgttttaacgccgagggctcagtcaataagtttgatcgagagaccctcaactcccttaac
gacgcactcgatgccctagcacaaacccaaggggttaagggtctgatgctcacctcgggc
aaagatgcctttatcgtaggcgccgacatcacagaattcctgggactttttgcacaagac
gacaacgtgctacagggctggctggaagacgccaacaaggtgttcaacaagctcgaagat
ctgcccttcccaactatctcggccatcaagggcttcgccctgggcggcggctgcgaaact
atcctagccacagacttacgtatcgccgacacctcggcgcgtatcggcctgccagagaca
aagctgggcatcattcctggatttggcggtacagtgcgtctgcctcgcgtgataggtgcc
gacaacgcacttgagtggatcaccacaggtaaagatcagcgcccagaagccgccctcaag
gttggtgccatcgacgccgtagttgccccagaactgctggaaacggcggcgcgccagatg
ctgcaagatgccatcagcgagaagattgactggcaagcccgtcgtcagcgtaagctgtca
ccgctgaccctgcctaagttggaagccatgatgtcatttgccaccgccaagggcatggtg
ttcaaggttgccggtaaacactatcctgcgcctatggctgttgtcgaagtgatcgagaag
gccgccttgagcgagcgcgccgaggcactacaggtagaacatcaggccttcatcaagcta
gccaagacagacgtggccaaggcgcttatcggtatcttccttaacgaccaactggttaaa
ggcaaggccaagaaggctgccaaacaggcacaagcggttaactcagccgccgtgctgggc
gctggcatcatgggtggcggtatcgcctaccaaagcgccagcaagggcacgccgatcgtg
atgaaagatatcaatcaggcggcattggatcttgggctcaacgaggcagccaagctgctc
acggcgcagatcaatcgtggtcgctcgacaccggccaagatggcgggcgtactcaacaac
atcacggcaaccctggactacaacgcgctcaagcaagccgatgtcgtggtcgaagccgtg
gtggaacatcctaaggtgaaggcgaccgtactggcggaagtcgagcaggtcgtgggcgaa
gatgccatcatcacctctaacacctccaccatctcaatcaatctgctggccaagagcctg
cagaaaccagagcgcttctgtggcatgcacttcttcaacccggtacacaagatgccactg
gttgaggtgatccgcggcgagcatagcgctgaagagacagttgcctctgtcgtggcttac
gccgccaagatgggcaagacgcctatcgtggtcaacgactgcccaggcttcttcgttaac
cgtgtactcttcccctacttcgccggcttcagcggcctgctagaagatggcgccgacttt
gctgccatcgacaaggtgatggagaagcagttcggttggcctatgggccccgcctaccta
ctagacgtcgttggtctggacacgggtcatcacgcccaggccgttatggccgaaggcttc
cctgacagaatggctaaagaaggcaaagacgccatcgacgtcatgttcgaagccgagcgc
ttcggtcagaagaatggcaaaggcttctaccaatattcggtagatcgtcgtggcaagccg
aagaaagaggtcgacccactcagctatgaactactgggcaacgccttcggtgagcagaag
gagttcagcagcgacgagatcatcgcccgcaccatgatccctatgatcatcgagacggtt
cgttgtctggaagaaggcatcatagccacgccggccgaagccgatatgggacttgtttat
ggactcggtttccctccattcagaggaggtgtgttccgctacctagacaccttaggtgtc
gctaacttcgtcgcccttgccgaccagtacgcccacctaggcggcctgtatcaggtaacc
gacaagatgcgtgaactggctgccaccaacggcagttactacctagcctaa
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