Shewanella spartinae: K0I31_00690
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Entry
K0I31_00690 CDS
T09209
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspa03016
]
K0I31_00690 (trmA)
Enzymes [BR:
sspa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
K0I31_00690 (trmA)
Transfer RNA biogenesis [BR:
sspa03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
K0I31_00690 (trmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_4
Methyltransf_25
Methyltransf_15
Methyltransf_31
MTS
Methyltransf_11
Cons_hypoth95
PrmA
Methyltransf_12
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
QYJ93960
LinkDB
All DBs
Position
complement(147835..148932)
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AA seq
365 aa
AA seq
DB search
MNVDAMDPQQYDAQLDVKRQKLAQLFADFETPELEVFASQKAHYRMRAEFRVWHEGEDLY
YYMFDKAQNQKIRCEQFLPASQLINDMMPELMAALRPNPVLRHKLFQVDFLSTLSGEILV
SLLYHKQLDAQWQEEAQALKQSLSSKFKVDIIGRARKQKLVMDRDFVIESLPVNGKQLTY
KQVENSFTQPNGEVAIKMLEWAIDITRNSSGDLLELYCGNGNFSIALAQNFNRVLATELA
KPSVDSAQYNIEANQIDNLQIIRMSAEDFTDALAKKRSFRRLEGVDLDSYDCNTIFVDPP
RAGLDDNTLSMVQGYERILYISCNPNTLLDNLKVLDKTHKITRFALFDQFPYTDHMESGV
LLERR
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtagacgcaatggatccccagcaatatgacgcacaactcgatgtgaagcgtcag
aaactagcccagctatttgccgacttcgagacacccgaactggaagtgtttgcctcacag
aaagcccactaccgcatgcgcgccgagttccgcgtctggcatgagggtgaggatctctac
tattacatgttcgataaggcgcagaaccagaagatacgctgcgagcagttcttaccggca
agtcagttgatcaacgacatgatgccagagcttatggcggcgctgcgtcctaacccagtc
ctgagacataagctgttccaggtggattttctctctaccctcagcggagagatcttagtg
tcactcctgtaccacaagcagctcgatgcccagtggcaagaggaagctcaggcgctgaaa
cagtcactgtcgagcaagttcaaggtggacatcataggccgcgctcgtaagcagaagctg
gtgatggatcgcgacttcgttatcgaatccctacccgtcaacggcaaacagcttacctac
aagcaggtcgagaacagctttactcagcctaacggcgaggtggcgatcaagatgctcgag
tgggccatagacatcacccgcaatagcagtggtgacctgttggagctctactgcggcaac
ggtaacttctctatcgccctggcacagaacttcaaccgcgtgctcgctaccgaactggcc
aagccatctgtggactcggcccagtacaacatagaagcgaaccagatagataatctgcag
atcatccgtatgtcggcggaagactttaccgatgcgctggccaagaagcgcagcttcaga
cgcttagaaggtgtggatctggacagctatgactgcaacaccatcttcgtcgacccgcca
agagcaggcttagatgataataccctgtctatggtgcagggctacgagcgtattctctat
atctcttgtaatcccaataccctgctggacaacctcaaggtgttagacaagacccataag
atcacccgcttcgcgctgttcgaccagttcccttatacagatcatatggaatctggcgtc
ctgctggaacgtcgttaa
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integrated database retrieval system
