Shewanella spartinae: K0I31_00735
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Entry
K0I31_00735 CDS
T09209
Symbol
birA
Name
(GenBank) bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
sspa
Shewanella spartinae
Pathway
sspa00780
Biotin metabolism
sspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
K0I31_00735 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspa03000
]
K0I31_00735 (birA)
Enzymes [BR:
sspa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
K0I31_00735 (birA)
Transcription factors [BR:
sspa03000
]
Prokaryotic type
Helix-turn-helix
Other families
K0I31_00735 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
Rrf2
HTH_24
HTH_5
HTH_20
HTH_1
Fe_dep_repress
HTH_36
MarR_2
BPL_LplA_LipB_2
HTH_Crp_2
HTH_28
HTH_23
HVO_A0261_N
HTH_DeoR
MarR
HVO_A0114
Motif
Other DBs
NCBI-ProteinID:
QYJ93964
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All DBs
Position
158118..159077
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AA seq
319 aa
AA seq
DB search
MHDQWARRRDIIRLLSQGQFVSGEALASELGISRAAVSKQVANLEEFGVDIYSVKGKGYK
LATPISLIDEAKLKAAIKNRCFYFNEINSTNGFLLEHVKDLSSGDICVAEYQSAGRGRRG
RQWVSPYGCHLYTSFYWQFSQGMAQAMGLSLVVGCSLVTVLRSLGVDGIGVKWPNDIYLN
HKKLAGILIEMSGQADSVCDLVIGIGINLSMSPAQADKIDQPWSDLSELAQLPDKTELMI
ALQQQLVTDLELFQRQGLKAFQSRWREADLFDGEPIKLLMGENSVEGICCGIDEQGAILL
KTEEGTKAFVGGEISMRPA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcatgatcagtgggcccgtcgccgggatattattcgtttgttgagtcagggccagttt
gtgtctggcgaggcgctggccagtgagctcggcatctctcgggcggcagtcagcaagcag
gtagccaacttagaagagtttggtgtcgacatctatagcgttaaaggcaagggctataag
ttagccacacctatctcgcttatcgatgaggctaagcttaaggccgctatcaagaatcgc
tgcttctattttaatgagatcaacagcaccaatggtttcctactcgagcatgtgaaggat
ctcagcagtggcgatatctgtgtggccgagtatcagtctgccgggcgtggacgccgcggg
cgtcaatgggtatctccctatggatgccacctctatacctccttctattggcagttttct
caggggatggcccaggcgatggggcttagcttggtggtaggctgctctttggtaacagtg
ctgcgttcactgggagtcgatggcataggggttaagtggccgaacgacatctacctcaac
cataagaagcttgcggggatactgatcgagatgagtggccaggcagacagtgtttgtgac
ctggtgataggtataggcatcaacctctctatgtcgccggcgcaggcggataagatagat
cagccctggagcgatctgtctgagttggcgcaattgccggacaaaacggaattgatgatt
gcactgcagcagcaattagtgacagatctcgaattgtttcaacgccaaggcctgaaggca
ttccagtcaagatggcgcgaggccgatctgttcgacggtgagcctatcaagctgttgatg
ggagagaatagcgtcgaggggatctgctgcggcatcgacgagcagggagcaatactgctt
aagacggaggagggcactaaggccttcgtcggcggtgagatctccatgcgtcccgcataa
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