Shewanella spartinae: K0I31_01650
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Entry
K0I31_01650 CDS
T09209
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sspa
Shewanella spartinae
Pathway
sspa00300
Lysine biosynthesis
sspa00470
D-Amino acid metabolism
sspa01100
Metabolic pathways
sspa01110
Biosynthesis of secondary metabolites
sspa01120
Microbial metabolism in diverse environments
sspa01230
Biosynthesis of amino acids
Module
sspa_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
K0I31_01650 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K0I31_01650 (dapF)
Enzymes [BR:
sspa01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
K0I31_01650 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
Motif
Other DBs
NCBI-ProteinID:
QYJ94128
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All DBs
Position
362927..363766
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AA seq
279 aa
AA seq
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MIHFTKMHGLGNDFMVVDGVTQNVYFSPEQIKRLADRNFGIGFDQLLLVEPPYDPDLDFH
YRIFNADGSEVEQCGNGARCFARFVKSKGLINKQKIKVSTSSGKMTLRLERDGSITVNMG
IPVLEPSRIPFNAKKAEKTYLLQADMPEGMQTFLCGAVSMGNPHCVLEVDDVANADVERI
GSLLTKHERFPKGVNVGFMQVVDANHIKLRVYERGAAETLACGSGACAAVAVGQLQGKLA
RRVRVDLPGGSLTINWEGEGKPLWMTGPAEHVYDGQIQQ
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
ttgatccatttcaccaagatgcacggtttaggcaatgactttatggtggtcgatggcgtg
acgcagaacgtctatttctcgcccgagcagataaagcgcttagcggatcgcaacttcggc
atcggtttcgatcagctcctgttggtggagccgccctatgatcctgatctggattttcac
tatcgcatctttaatgccgatggcagcgaagtcgagcagtgtggcaatggcgcccgctgt
ttcgcgcgcttcgtaaagagcaagggattgatcaacaagcagaaaataaaggtcagtacc
tcttctggcaagatgaccttgcgccttgagcgtgacggcagcatcacggtcaacatgggg
atccctgtgctggagccgagccgcatccccttcaatgccaagaaggcggagaagacctac
ttgctgcaggccgatatgcctgagggcatgcagaccttcctctgcggtgccgtgtctatg
ggtaatccccactgcgtgctcgaggtcgacgacgtagccaacgccgatgtcgagcggata
ggttcactgctgaccaagcatgaacgcttccccaagggggtgaacgtaggtttcatgcag
gtggtcgatgcaaaccatattaaacttagagtgtatgagcgcggcgcggccgaaaccttg
gcctgtggcagcggcgcctgtgcggccgtggccgtgggccaactgcaaggcaagcttgcc
agacgcgtgcgggtcgatcttcccggtggtagcttaaccattaactgggaaggcgagggt
aagcccctatggatgacggggcctgctgaacatgtatacgatggacagatacagcaatga
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