Shewanella spartinae: K0I31_04120
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Entry
K0I31_04120 CDS
T09209
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
sspa
Shewanella spartinae
Pathway
sspa00630
Glyoxylate and dicarboxylate metabolism
sspa00680
Methane metabolism
sspa01100
Metabolic pathways
sspa01120
Microbial metabolism in diverse environments
sspa01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K0I31_04120 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
K0I31_04120 (fdhF)
Enzymes [BR:
sspa01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
K0I31_04120 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
Pyr_redox_3
Fer4_7
NAD_binding_8
Fer4
DAO
Fer4_9
FAD_oxidored
Fer4_8
HI0933_like
Fer4_21
Fer4_6
NAD_binding_7
Fer4_18
Fer4_17
Fer4_Nqo3
Fer4_10
FAD_binding_2
FAD_binding_3
GIDA
Lys_Orn_oxgnase
Amino_oxidase
Thi4
AlaDh_PNT_C
F420_oxidored
Fer4_15
Fer4_13
2-Hacid_dh_C
Fer4_2
Fer4_16
Emfourin
Fer4_22
CxC7
Motif
Other DBs
NCBI-ProteinID:
QYJ94584
LinkDB
All DBs
Position
complement(927198..931430)
Genome browser
AA seq
1410 aa
AA seq
DB search
MIELTFDGQVVKANRGEDLLTCAKAAGIAIPNLCHLGKQLDDKLAGKQDCNLCYVEVRDE
KGDFHTVKACKTQVEAPLEVITHSAALSKRRQAALKHLLSDHFADCEAPCQQACPAGVDV
QSYLLHIAQGNHKEAVKVIKQTLPLPLSIGRVCPAFCESACRRGELDEPLAIRQLKRHAA
DLDLDSEDTYVPPKAPATGKRVAIIGSGPAGISAGYYLSNSGHEVTIFESMPKAGGWLRY
GIPEYRLPKQILDREIDLLCQNGLVIQTDTRLGRDIHLKELVNQFDAVCLAIGAQKAVPM
NYPGVDLEGCYLGVDYLKDHCTDNNYHTGQKVAVIGGGNTAIDCARTALRKGAEVTLVYR
RTRDEMPAEAYEIEEAEHEGVRFYFLTNPIENHGDANGRINAVTFEKMRLGEPDASGRRS
PKATGETFTEAFDTVIPAVSQTPDMTFLEHPESQLSTGEVALTRWNTFSGCEHTMSSGVE
KLFVLGDSRTGPATAVAAVADGRKAANAIEKLLSGELSCELTPAPFNSQKQDEQKPDSRH
FPARLLQAKAKMPELAINKRLDNFDEIELGFNDEEAMLEAARCLECGCQANTECALRDYA
TEYRVDGAALDKQGHRAFTQDASTPFINFDPNRCISCGACVAMCRQQSGHQAISFEPDSY
LALPKEMAETHSRQAPRAGFSATMADSQCVQCGNCVQVCPTGALTDARDKRQGVKHELKQ
TSTVCTYCGVGCRVIIHSDPLTGEIKRVSGDNRSQVNEGMLCVKGRFGFDFINSQQRLTQ
PLLRRDGELVPVSWNEAIDYIGTQLGRIKAEHGGDAIAGLASAKATNEDNYLFQKLFRSV
IGTNNIDHCARLCHASTVTALQESLGSGAMTNDIPSIKSSDLIFILGSDTEAAHPIIASK
IKQAVNQHGARLVVADPKRVSIADSAELYLRHRPGSDVMLLNAIMQEIIKQGWHDSDYIS
RRVEGFDALRAEVMKDDYSLSNAAKITGVGEEEIAQLARMIGTAEKTAIYYAMGITQHTS
GHDNVTAIANLQLLCGNIGVEGAGINPLRGQSNVQGACDMGALPNYFTGYQKVTDPEVQA
AFRQAWQQEWLPDQIGLAATEMMHALAHGKLKALYVMGENPVLSDPDQAHVMQGLESAEL
LIVQDIFMTETAQLADVVLPAASFAEKPGHFTNTERRVQRLQAAIDSPGLARRDWQIITD
IAKALGADWRYEDEASIWQELTRVTPQYRGIQWQDTDPSTPQGLQGKQWPSPEPGHEGTR
LMHRERFTRGLGKMTPVGYRLPAELPCEDYPFTLSTGRLLEQFHTGTLTRKTDGLNTLGS
PRVMMSAIDADRLGVNNGDVLTLSTRRGSINIAAFVTRRAQPGVLFLPFHFAEAAANKLT
NNVLDPVAKIPEFKICAVRVEKASEAICWS
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgatagaactcaccttcgacggccaggtcgtcaaagccaaccggggcgaagatctgctc
acctgtgccaaggccgcaggcatagcgatccctaatttatgtcatctgggcaagcaactg
gacgacaaactcgcgggcaaacaagactgtaacctctgctatgtcgaggtgcgagacgaa
aagggcgacttccacacagtcaaggcctgtaagacacaggtcgaggcaccgctcgaggtg
atcacccattcggccgcccttagcaagcgccgccaggcggcgctgaaacatcttctgagc
gaccacttcgccgactgcgaagcgccctgccaacaggcctgtccggccggcgtagacgtg
cagtcctatctgctgcatatcgcccagggcaaccacaaggaagcggtcaaggtgatcaaa
caaaccctgccgctgccgctctctatcggccgtgtctgcccggcgttttgcgaatcggcc
tgtcgccgcggcgagctggatgagcccctggccattcgccaactcaagcgtcacgccgcc
gacctggatttggacagtgaagacacctatgtgccgcccaaggcgcccgccaccggcaaa
cgcgtcgccatcataggcagcggcccggcggggatcagcgcgggttactatctctccaac
tcaggtcacgaggtgaccattttcgagtccatgcccaaggcgggcggctggctaagatac
ggtatccccgagtaccgtctgcccaagcagatactggacagagagatagacctgctgtgt
cagaatggcctagtgatacagacagatactcgcctcggccgagacatccacctcaaggag
ctggtcaaccaattcgacgccgtctgtctcgccatcggcgcccagaaggcggtgcccatg
aactacccgggtgtagacctcgaaggctgctacttgggggtggattaccttaaagatcac
tgcacagacaacaactaccacacaggccagaaggtggcggtgatcggcggcggcaacacc
gccatcgactgcgcccgcaccgcgctacgcaagggcgccgaggtgactctggtctatcgc
cgcacccgcgacgagatgccggctgaggcctatgagatagaggaggccgaacatgagggc
gtgcgcttctatttcctcactaaccccatcgaaaaccatggcgacgccaatggccgtatc
aatgccgtcaccttcgagaagatgcgcctgggcgagcccgatgcctccggcagacgctca
cctaaggccacgggcgagaccttcaccgaggcgttcgacactgtgatacccgcggtctcc
cagaccccggacatgaccttcctcgagcatccagagagccagctctccaccggcgaggtg
gccctgacccgctggaacaccttctccggctgtgaacatactatgtccagtggagtagaa
aagctgttcgtgctcggtgattcgcgcaccggcccagccacggcggttgccgcggtggcc
gatgggcgtaaggccgccaatgccatcgagaaactgctgagcggcgagctgagctgtgaa
ctgacacctgcgcccttcaactcccagaagcaggatgagcagaagccagacagccgtcac
ttcccggctcgtctgctacaggccaaggccaagatgccggaactggccatcaacaagcgc
ctggataatttcgacgagatagaactcggctttaacgacgaggaggcgatgctcgaggcc
gcccgctgcctggagtgtggctgtcaggccaacactgagtgtgccctgcgggattacgcc
accgagtaccgtgtcgatggtgccgcgctcgataaacagggccaccgcgcctttacccag
gatgccagcacaccttttatcaacttcgaccccaaccgctgcatcagctgcggtgcctgc
gtcgccatgtgccgccagcagtctggccatcaggcgatcagcttcgagcccgacagttac
ctggcactgcccaaggagatggccgaaacacacagccgccaggcgcctcgcgccggattc
agcgccaccatggccgacagccaatgcgtgcagtgcggtaattgtgtccaggtctgcccc
acaggggcgctgaccgatgcaagagacaagcgtcagggcgttaaacatgagctgaaacag
acctccaccgtctgcacatactgcggcgtgggttgccgtgtcatcatccacagcgatccc
ctaactggcgaaatcaaacgcgtctcgggcgacaaccgatctcaggtcaacgaggggatg
ctctgcgtcaagggccgcttcggattcgacttcatcaacagccagcaacggctgacccag
ccgctgctgcgcagagatggtgagctggtgccggtcagctggaatgaggcgatcgattac
ataggcactcagctgggtcgcatcaaggccgaacatggcggcgacgccatcgcgggcctg
gcctccgccaaggcgaccaatgaagataactatctgttccagaagctgtttagaagcgtc
atcggcaccaacaacatagatcactgcgcccgcctgtgtcatgcctcgacggtcaccgcc
ctgcaagaaagccttggcagcggcgccatgaccaatgatattccgtcgataaaatcctcg
gatctcatcttcatcttgggctcggataccgaagccgcccaccctatcatcgcctccaag
atcaaacaggcggtgaaccaacacggtgcccgcctggtggtggccgaccccaaacgggtg
agcatcgccgacagcgccgagctctacctgcgtcaccgccccggcagcgacgtcatgctg
ctcaacgccatcatgcaggagatcatcaagcagggctggcacgacagcgactacatcagt
cgccgtgtcgaaggattcgacgcactgcgcgccgaggtgatgaaggacgactacagcctg
agtaacgccgccaagatcaccggggttggcgaagaggagatagcccagctggcccgcatg
ataggcacggcagagaagaccgccatctactatgccatggggatcacccagcacacctcg
ggacatgacaatgtcaccgccatcgccaacctgcaactgctgtgcggcaacataggggtc
gagggcgcggggatcaacccgctgcggggccagagcaatgtccagggcgcctgtgacatg
ggcgccctgcccaactacttcaccggctatcagaaggtcaccgaccccgaggtgcaagcc
gccttcaggcaagcctggcagcaggagtggctaccggatcagataggtctggcggccacc
gagatgatgcacgccctggcccacggcaagctcaaagccctctatgtgatgggagaaaac
cctgtactgagcgatcccgatcaagcccatgtgatgcaagggctggagtcggccgagctg
ctgatcgtccaggatatcttcatgacggagacggcacagctggccgatgtggtgttgccg
gccgccagcttcgccgagaagccaggccacttcaccaataccgagcgccgggtgcagcgc
ctgcaggctgccatcgacagcccaggcctggcccgccgcgactggcagatcatcactgat
atcgccaaggccctcggcgccgactggcgctatgaggatgaagcatccatctggcaggag
ctgacccgcgtcaccccccagtatcgcggcatccaatggcaggacacagaccccagcacg
ccacaaggtctgcagggtaagcagtggcccagcccagagcctggccatgagggcacccgc
ctgatgcatagagagcgctttacccgagggctcggcaagatgacccccgtcggctaccgc
ctgccggccgagctgccctgtgaggattatcccttcaccctctccaccgggcgcctgctg
gagcagttccacactggcaccctaacccgcaagacggacggcctcaataccctgggctca
cccagggtgatgatgtcggccatcgacgccgaccgtctgggggtgaacaacggcgacgtg
ctgaccctgtccacgagacgcggcagcatcaacatcgccgccttcgtcacgcgccgcgcc
cagccgggagtgcttttcctgcccttccactttgccgaggcggcggctaacaagctgacc
aacaatgtgctggatcctgtggccaagatccccgagtttaagatctgcgccgtcagggtc
gagaaggccagcgaggcgatctgttggtcttag
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integrated database retrieval system
