Shewanella spartinae: K0I31_04650
Help
Entry
K0I31_04650 CDS
T09209
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspa03009
]
K0I31_04650
Enzymes [BR:
sspa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
K0I31_04650
Ribosome biogenesis [BR:
sspa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
K0I31_04650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF6052
Motif
Other DBs
NCBI-ProteinID:
QYJ94683
LinkDB
All DBs
Position
1035534..1036244
Genome browser
AA seq
236 aa
AA seq
DB search
MSAKRARLDRFISQHCQIPRKQVRLILAKGRVSVDGQVVRDADCQIDQFSQVMLDGQALR
QEQPIYLMLHKPVGVVSATKDDEHKTVMDLLPNYQDKGLHIVGRLDLNTSGLVLLTNDSR
WSKRIMSPEHKVAKQYLVTLKAPLTQAYVKAFAEGFYFAFENITTQPALLEILEPHLARV
TLHEGRYHQIKRMFGRFRNQVMALHRLSVGNLTLDKTLAVGEYRPLTPLEVASIFG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctaaacgcgccaggctggatcgttttatcagccagcattgtcagatcccccgc
aagcaggtgcgcctcatcctggcaaagggccgggtgagtgtcgatggtcaggtggtgcgc
gatgcagactgtcagatagatcaattctctcaagtgatgctcgatggtcaggcgctgagg
caggagcagcccatctatctcatgctgcataagccggttggtgtggtgagcgcgaccaag
gacgatgagcataagacggtgatggatctcttgcccaactatcaggacaaggggctgcat
atcgtcgggcggctggatctcaacacctcgggtttggtgctacttaccaacgacagccgc
tggtcgaagcgtatcatgtcgccggagcataaggtggccaagcagtatctggtcaccctc
aaggctcccctcacccaggcctatgtgaaggcctttgccgagggcttttactttgctttt
gagaatattaccactcagccggccttgcttgagatcctcgaaccccatctggccagggtc
actctgcatgaggggcgctaccatcaaatcaagcgcatgtttggccgttttcgcaatcag
gtgatggcgctgcacaggctctccgtgggtaacctaaccctggataaaaccttggctgta
ggggagtatcgtccgctgacgccactggaggtggctagcatattcggctaa
DBGET
integrated database retrieval system
