Shewanella spartinae: K0I31_06485
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Entry
K0I31_06485 CDS
T09209
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspa02000
]
K0I31_06485 (bamB)
Transporters [BR:
sspa02000
]
Other transporters
Pores ion channels [TC:
1
]
K0I31_06485 (bamB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
Beta-prop_WDR36-Utp21_1st
Beta-prop_LRRK2
DUF6906
flgE_D3
Motif
Other DBs
NCBI-ProteinID:
QYJ95026
LinkDB
All DBs
Position
1465620..1466807
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AA seq
395 aa
AA seq
DB search
MKSWCKTLLACSLSLGLLSACSSNDVEEEPVSPLPQIEASVFPEVSWSASVGSGVGDYYS
KIRPAVRYGKLFVMDRYGEVAAYDEATGEQVWSLEISSWFKEGALSKNKGARLSSGITAA
RNKVFFGGESGLLGAVDAETGEMVWHVTAGGELLSAPTVGEDVVVVHTSTGALEAYNVDD
GKQLWVYESKLPTLTLRGTGSAAYEAGGFFVGTADGKVAVVVKSNGQAAWEQPIYTPKGG
NEFTRMADVDMKPLIVGENIYAVSYNGNLVSMELRTGRVVWSRKYSSFNELASAGLNLYL
VDDHGRVYAVDKRNGLESWSNSELTNRELTSPVVFKDYLVVGDFEGYLHFIDRASGKLVG
RVEVDSSGLFSQPLVIDDKIYVQSRGGKVARITLP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttggtgcaaaacattactggcttgcagcttgagcctggggttgctgtcggcc
tgttcttctaacgatgttgaggaagagccggtaagtccgctgccgcagatcgaggcgagc
gtcttccccgaggtgagctggagtgcctccgtcggcagtggtgtgggtgactattactct
aagatccgtcctgcggtgcgctacggcaagctgtttgttatggatcgttacggtgaagtc
gccgcctacgacgaagccactggtgagcaggtctggtcgctcgagatcagctcttggttc
aaagagggcgccttgtctaagaacaagggcgcgcgtctctcttctggcattactgccgcc
cgtaacaaggtgttcttcggtggtgagagtggcctgctgggcgccgtcgatgccgaaacc
ggcgagatggtctggcatgtgaccgcaggcggtgagctgctgtcggcgccaactgtgggt
gaagatgtggtggtggtgcacaccagcacaggtgctctggaagcctataacgtcgatgac
ggcaaacagctgtgggtttacgagagcaagttgccaaccctgaccctaaggggcacaggt
tctgctgcctatgaggccggaggcttctttgtcggcaccgccgatggcaaggtcgcggtt
gtggtgaaaagcaacggtcaggccgcctgggagcagcctatctatacgccaaaagggggt
aacgagtttacccgcatggccgacgtggatatgaagccgcttatcgtgggcgagaacatc
tatgcggtgagctataacggtaacctggtctctatggagctgcgtacaggccgtgtggtc
tggagccgtaaatattctagcttcaacgagttggcttcggccggtctgaacctttacctg
gtggatgaccacggccgtgtgtatgcggtcgataagcgtaacggcctggaaagctggagc
aacagcgagctgactaaccgtgaattgacctcgccagtggtcttcaaagactacctggtg
gtgggtgatttcgaaggctatctgcatttcatcgatcgcgcctcaggtaagctggtgggc
cgcgtcgaagtggatagttcaggtttatttagccagccactggtaatagatgataagatc
tacgtccagagtcgtggcggcaaggtagcaagaattacgcttccctaa
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