KEGG   Shewanella spartinae: K0I31_07405
Entry
K0I31_07405       CDS       T09209                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
sspa  Shewanella spartinae
Pathway
sspa02020  Two-component system
Brite
KEGG Orthology (KO) [BR:sspa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K0I31_07405
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:sspa02022]
    K0I31_07405
Two-component system [BR:sspa02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   K0I31_07405
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 AAA_5 HTH_8 AAA_2 HTH_50 AAA_16 AAA_3 AAA_RNF213_3 AAA AAA_7
Other DBs
NCBI-ProteinID: QYJ95196
LinkDB
Position
complement(1670416..1671783)
AA seq 455 aa
MQNQVFNQYDILIVDDEPLIGSALVQLFELESYRALALTDAKQIGLGLPDNWPGIVISDV
NMPDIDGLSLMRTLLAQDKDIPIILLTGHGDIAMAVQALKQGAYDFIEKPFNNEHMLDIA
KRALEKRALTLENRSLKRELESQSTPGPRILGHSPGIRQMRHIIHQVIDMPADVLIEGET
GTGKELVARYLHDHSPRAEANFVAINCGAIPETIIESELFGAESGAFTGADKTRIGKFEY
ANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSIDLDIRIIAATKVDLKSLCDT
GEFRQDLLYRLNLVTVPIPALRERREDIGLLFLHFARVASARYHKALIPLTAEYTALLVS
HDWPGNVRELRNLAERYVLLGPEAAFATSLGQSSQLNANMSLQQRVEFFERLLIEEALSN
NKGSIKLTMEQLELPRKTLYDKMQKFGLNRKTFIN
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgcaaaatcaagtttttaatcaatacgacatcttaatcgtcgacgacgagcccctgata
ggctcggccctggtgcagctgtttgaactggaatcctaccgcgccctggccctcaccgac
gccaaacagattggcctcggcctgcccgacaactggccgggcatagtgatctcagacgtc
aacatgccagatattgacggcctgtcgctgatgcgcaccctgctggctcaggacaaggat
attcccatcatactgctgaccggccacggtgatatcgccatggcggtgcaggcgctgaaa
cagggggcctatgattttatcgagaaaccctttaacaacgagcacatgctggatatcgcc
aagcgcgcgctggagaaacgcgccctcaccctggaaaaccgcagcctgaaacgtgagctg
gaatcccagagcacccctgggccacgtatcctgggccacagcccggggatcaggcagatg
cgccacatcatccatcaggtgatcgacatgcccgccgatgtgttgatcgaaggcgagact
ggcacgggcaaggaactggtcgcccgctatctgcacgaccacagccccagagccgaggcc
aacttcgtcgccatcaactgcggcgccatcccagagaccatcatagagagcgagctgttt
ggcgccgaatctggcgccttcaccggcgccgacaagacacgtatcggcaagttcgagtat
gccaacggcggcaccctgtttctcgacgagattgagagcacgccgctgtccttgcaggtt
aagctgctcagggtattggaagacaggaaggtggagcgcctcggctccaataagagcata
gacttagatattcgcatcatcgccgccactaaggtggatcttaagagtctgtgcgacaca
ggcgagtttcgccaggatctcctctatcgcctcaatctggtgacggtgccgattccggcc
ctcagggagcgacgcgaagatatcggcctgctgtttctgcatttcgcccgggtcgcctcg
gcccgctatcacaaggccttgatccccctgacggccgaatacacggccctgctggtctca
cacgactggcccggcaatgtcagggagctgcgcaatctggccgagcgttatgtgctctta
gggccagaggcggcctttgccacctccctgggacagagcagtcaactcaacgccaacatg
tcgcttcaacaaagagtggagtttttcgagcggctgctgatcgaagaggcgctgagtaac
aacaagggcagcatcaagctcaccatggagcagctggagctgccgcgcaagaccctctat
gacaagatgcagaagttcggcctcaaccgtaagaccttcatcaactaa

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