Shewanella spartinae: K0I31_07660
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Entry
K0I31_07660 CDS
T09209
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspa03400
]
K0I31_07660 (phrB)
Enzymes [BR:
sspa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
K0I31_07660 (phrB)
DNA repair and recombination proteins [BR:
sspa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
K0I31_07660 (phrB)
Prokaryotic type
K0I31_07660 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QYJ95225
LinkDB
All DBs
Position
1714310..1715758
Genome browser
AA seq
482 aa
AA seq
DB search
MSALLWLRRDFRLHDNPALSEAVRLGVKQAIFIATPAQWQQHDMAPIKADLIRRHLELMA
GELAEYGIELVILSATDFSDQVRALCEYCRDHGVNLLLANNEPELDEQERDKQVMAAGID
LRLWQNDCILPPGSVLNQQGEMFKVFTPFKKAWLKCVAAQGIECVPTPAKSTPAKLVGDV
QAAAKLAQQPTPQPTSQSSSINLDYPLVDSRRWPDSEQVMSQLLPHFWQDKLLDYGERRD
FPAIKGTSGLSPYLAIGAISSRWLALQLVQRHPEVIYDTQHGAFTWLNELIWRDFYKHLL
FHYPELIKGRSFQPKYESLPWPNNEAHFQAWCEGRTGYPIVDAAMKQLHRTGWMHNRLRM
IVASFLTKHLLVDWHKGERFFMQQLIDGDFSANNGGWQWAASTGCDAQPYFRIFNPITQS
QKFDPRGDFIRKYLPELSEVPDKQIHFPHDYLASQGKAEIYPAPIVDHKAARQRALAFYK
VE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgcactcttgtggctgagacgggatttccgtctccatgataatcccgccttgagt
gaggcggtgcggctcggggtgaaacaggcgatctttatcgccaccccagcccagtggcag
caacatgatatggcgccgataaaggccgatctcattcgtcgtcacctcgagctgatggcc
ggtgagttagctgagtacggcatcgagctggtcatcttgtctgctacagattttagcgat
caggtgagggcgttatgcgaatactgccgcgaccatggcgtcaacctgctgctggccaac
aacgagcctgagctcgatgagcaggagcgcgataaacaggtgatggcggcggggatcgat
ctgcgcctgtggcaaaacgattgtatcttgccgccgggcagcgtgctcaaccagcaaggg
gagatgtttaaggtctttaccccctttaagaaggcctggctaaagtgtgtggcggcccag
ggcatagagtgtgtgccgacgccggccaaatcgacgccggcaaaattggtcggtgatgtt
caagcagcggctaagctagcacaacagccaacaccacagccaacatcacaatcatcaagc
ataaacctagattatcccctggtggactccaggcgatggcccgacagtgagcaggtgatg
agccagctgctgccccatttctggcaagataagctgctcgattatggcgagcggcgcgat
tttccggccatcaaggggacatcaggcctatcgccttatctggccattggggcgattagc
tcgcgctggctggcgctgcaactggtgcagcgccatcccgaggtgatctacgacacacag
cacggcgccttcacctggctcaacgagctgatctggcgggatttctacaaacatctattg
tttcactatccagagcttatcaagggcagaagctttcagcccaagtacgagtcgctgccc
tggcccaataacgaggcccactttcaggcctggtgtgaggggcgcaccggctaccccata
gtcgatgcggccatgaaacagctgcaccgtaccggctggatgcacaatcgcctgcgcatg
atagtggcgagtttcctcaccaagcacctgctggtggactggcataagggggagcgcttc
ttcatgcagcagttgatcgatggcgatttcagtgccaacaacggcggctggcagtgggcg
gccagcacgggctgtgatgcccagccctattttaggatctttaaccccatcacccagagc
caaaagtttgatcctcggggtgacttcatccgtaaatatctaccagagttgagcgaggtg
cccgacaagcagatccacttcccccacgactatttagcgagtcagggcaaggctgagatc
taccccgctccgatagtggaccataaggcggcgcgccaaagggccctggcattttataag
gtggaatag
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