Shewanella spartinae: K0I31_10065
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Entry
K0I31_10065 CDS
T09209
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sspa03032
]
K0I31_10065 (gyrA)
03400 DNA repair and recombination proteins [BR:
sspa03400
]
K0I31_10065 (gyrA)
Enzymes [BR:
sspa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
K0I31_10065 (gyrA)
DNA replication proteins [BR:
sspa03032
]
Prokaryotic type
DNA Topoisomerases
K0I31_10065 (gyrA)
DNA repair and recombination proteins [BR:
sspa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K0I31_10065 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QYJ95668
LinkDB
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Position
2255974..2258613
Genome browser
AA seq
879 aa
AA seq
DB search
MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSMRYTLVDGQGNFGSVDGDAAAAM
RYTEIRMDKLAHQLLADLEKETVDYVPNYDGTEQIPAVLPTRIPALLVNGSSGIAVGMAT
NIPPHNLSEVISGCLALIDEPSLSIEQLMEHIPGPDFPTAAIVNGRKGIEDAYKTGRGKA
VMRARATVETEDNGRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVIEVKRGEVGEVILNNLYAQTQLQTSFGINMVALTNGQPKLFNLKEMLECFILHRREV
VTRRTVFELRKARERAHILEALAIALANIDPIIALIKASPTPAEAKTKLVAQGWALGNVQ
GMLEKAGDDAARPEWLSAEFGIRDGLYYLTEQQAQAILDLRLHKLTGLEHEKILSEYEEL
LELIAALLYILRSPERLMEVIKEELQEVLEVFGDERRTELNASAVDISLEDLINEEDVVV
TLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYW
LKVYQLPLASRQARGRPIINLLPLAEGERITAILPVRDYDADKYVIMATSHGTVKKTSLD
QYSRPRANGIIAVNLKDGDQLIGVDITNGDNEVMLFSNEGKVVRFSEDQVRGMGRTATGV
RGIKLEDGQSVVSLIVPKNDGAILTVTENGYGKRTELDEYPAKSRATKGVVSIKVSERNG
AVVGAVQVLENDEIMLISDKGTLVRTPASGVSTIGRNTQGVTIIRTATDETVVGLQRIDE
IQDEQEFDEEGNPIITDTVDEQQVEGEAPEAEPDVEPNE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggcttcatctataacaccaattaatattgaagacgaattaaagaattca
tatttggattacgccatgagcgtgatcgtgggccgtgcgttacccgatgtacgtgacggc
ctaaagccggttcatcgccgcgtattattcgcgatgaacgagttgaagaacgattggaac
aaaccttataaaaagtcggcgcgtgtcgtcggtgacgttatcggtaaatatcacccacac
ggtgactctgcggtttacgacaccatcgttcgtatggcgcagccattctctatgcgctac
accttggtcgatggtcagggtaactttggttcggtcgatggcgacgctgcggcggccatg
cgttataccgaaattcgtatggacaagctggcgcatcaactgctggctgacctagagaaa
gaaaccgtcgactatgtacctaactatgatggtacagagcagatcccagcggtattgccg
acccgcattcctgctttgctggtgaatggttcatcgggcatcgccgtcggtatggcgacc
aacattcctcctcacaacctgtcagaagtgatctccggctgtttggctctgatcgatgag
ccaagtctctccatcgagcagctgatggaacatattcctgggccagatttcccaacggca
gcgatcgtcaacggccgtaagggtatcgaagatgcctataagacgggtcgtggaaaggcg
gtcatgcgtgcccgcgcaaccgttgagaccgaagataacggccgtgagcgtattatcgta
accgaaatcccttatcaggtgaacaaggcacgtctgatcgaaaagatcgccgagctggta
aaagataagaagatcgaaggcatcagcggcctgcgcgacgagtctgacaaagacggtatg
cgtatcgttatcgaagtgaaacgcggcgaagtaggcgaggtgatcctcaacaacctgtat
gcccagactcagctgcagacctcttttggtatcaacatggtggccctgaccaatggtcag
cctaaattgttcaaccttaaagagatgctcgagtgcttcatccttcaccgtcgtgaagtg
gtgactcgtcgtaccgtattcgaactgcgtaaggctcgcgaacgtgctcatatccttgaa
gcactagcgattgctctggccaacatcgaccctatcattgcgcttatcaaggcgtcacca
acccctgccgaagccaagactaagctggttgctcaaggctgggcccttggtaatgtacaa
ggcatgctggagaaggccggtgatgatgcagcgcgtccagagtggttgtcggcggagttc
ggtattcgtgatggtctctactacctgaccgagcaacaggcgcaggcgattttggacctg
cgtctgcacaagctgaccggtctggaacatgagaagatcctaagcgaatatgaagagctc
ctagagctgatcgcagccctgctatatatcctccgcagccctgagcgtctgatggaagtg
attaaagaagagcttcaggaagtgctagaagtgtttggcgatgagcgtcgcaccgagctt
aatgcctctgcggtcgatatcagccttgaagatctgatcaacgaagaagatgtagtagtg
accctgtcgcatctgggttacgccaagtatcagcctttgagcgattaccaggcccagcgc
cgtggtggtaagggtaaggctgcgactaaggtgaaggatgaagatttcgtcgagaagctg
ctggttgctaacacccacgacaccatcttgtgtttctctgacttcggtaagatgtactgg
ctcaaggtgtaccagctaccgctggctagccgtcaggcccgtggtcgcccaatcatcaac
ctgctgccgctggcggaaggtgagcgcattactgctatcttgccggtgcgtgattacgac
gccgacaagtatgtgatcatggcaacttctcacggcaccgtgaagaaaacctcgctggat
caatactctcgtccgagagccaacggtatcatcgccgttaacctcaaagatggcgatcag
ctgattggcgtcgatatcactaacggtgataacgaggtgatgctcttctctaacgaaggt
aaggtcgttcgctttagcgaagatcaggttcgtggcatgggccgcaccgcaacaggtgtt
cgcggtatcaagctcgaagatggccagagcgtagtctcactcatagtacctaagaacgac
ggtgcaatcctgaccgttaccgagaacggttatggtaagcgcaccgagctggatgaatac
ccagctaagagccgcgcaaccaagggtgtagtatcgatcaaggtgagcgagcgtaacggc
gccgtcgtcggggcggtacaagtactcgaaaacgacgagatcatgttgatcagcgataag
ggtaccctagttcgtacaccagcatctggcgtatcaaccataggtcgtaacactcaaggt
gtgaccattatccgtaccgctaccgacgagacggtcgttgggctgcagcgtatcgatgag
atccaagatgaacaggagtttgacgaagagggcaaccctatcatcacggatactgtcgat
gagcagcaagtcgaaggcgaagcgcccgaggctgagccagacgttgagccaaatgaataa
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