Shewanella spartinae: K0I31_10795
Help
Entry
K0I31_10795 CDS
T09209
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sspa
Shewanella spartinae
Pathway
sspa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K0I31_10795 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspa03400
]
K0I31_10795 (uvrB)
DNA repair and recombination proteins [BR:
sspa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K0I31_10795 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K0I31_10795 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
AAA
Ish1
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QYJ92147
LinkDB
All DBs
Position
complement(2417763..2419781)
Genome browser
AA seq
672 aa
AA seq
DB search
MSESAFDLVSQYAPAGDQPGAIKQLVDGLDAGLASQTLLGVTGSGKTFTIANVIKQMQRP
TIIMAPNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPSTNTFIEKDASVNAHI
EQMRLSATKALLERRDVVLIASVSAIYGLGDPESYMKMLLHLRQGDFMGQREILQRLSEL
QYTRNDIELDRGTFRVRGEVIDIFPAESDKQAIRVELFDDEIDRLSLFDPLTGHILQRIA
RTTVYPKTHYVTPREKILAATEEIKQELRERKQYLLDNNKLIEAQRISERVQYDIEMMTE
LGYCSGIENYSRYLSGRRPGEGPPTLLDYLPADGLLILDESHVTVPQIGAMYKGDRSRKM
NLVEYGFRLPSALDNRPLKFEEFESLMPQTIFVSATPAQYELDKSDGEIAEQVVRPTGLL
DPEIEVRPVAIQVDDLLSEANKRVAVNERVLVTTLTKRMAEDLTEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGVFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADNITKSMAKAIGETERRREKQHEFNLANGITPKGVSKKIADVMDL
GDYNEHTAKVLPKYQKVAESRTTYAKQDASSLSHQIDELEKRMHQHARDLEFEQAAALRD
EVLALREALIKA
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
ttgagtgaatcagcatttgatctcgtttcgcagtacgcgcccgccggcgatcagccaggg
gcgattaagcaacttgtcgacggcctggatgccgggctggcaagccagacactgcttggg
gtaacgggatccggcaaaacctttaccatcgccaatgttatcaaacagatgcagcgccca
actatcatcatggcgcccaacaagactttggcggcccagctctatggcgagatgaaggag
ttctttcctaataatgccgtggagtatttcgtctcctactacgactattatcagcccgaa
gcctatgtgccgtcgaccaataccttcatcgagaaggatgcctcggtcaacgcccatatc
gagcagatgcgactctctgcaactaaggcattgcttgaacggcgcgatgtggtgctgatc
gcctctgtgtcggccatctatggtctgggcgaccctgagtcctacatgaagatgttgctg
catctgcgtcagggcgattttatggggcagagggagatcctgcagcgcctgagcgagctg
caatatacccgtaacgatatcgagctggatcgcggcaccttcagggtacgcggtgaggtg
atagatatcttcccggccgaatctgacaagcaggcgatccgtgtcgaactgttcgacgat
gaaattgaccgtctcagcctgttcgatcccttgaccggccatattttgcagcgcatcgcg
cgcaccactgtctatcctaagacccactatgtgacgcccagagagaagatcctggcagcc
acagaggagatcaagcaggagctcagagagcgcaagcagtatctgctggacaataataag
cttatcgaggcgcagcggatctccgagcgggtgcaatacgatattgagatgatgacagag
ctgggatactgctccggcatcgaaaactactcccgctatctctctggcagacgtccgggt
gaggggccgccgaccctgctggattatctgcccgccgacggtctgttgatcctcgacgag
tctcacgtgaccgtgccacagatcggcgccatgtataagggggaccgttcccgcaagatg
aatctagtggagtatggtttccgtctgccctcggcgctggacaaccgtccgctcaagttc
gaagagtttgagtctttgatgccacagaccatcttcgtgtcggcgaccccggcccagtat
gagctggataagagtgacggcgagatcgccgagcaggtggtgcgcccgacaggcctgctg
gatcccgagatagaggtgcgcccggtggctattcaggtggacgacctcttgtctgaagcc
aacaagcgcgtcgcggtgaacgaacgggtgctggtgaccacgctaaccaaacgtatggcg
gaggatctcaccgagtatctcgatgagcatggtgtcaaggtacgttatctgcactcagac
atagatacggtcgagcgggtggagatcatccgcgacctgcgcctcggtgtgttcgatgtg
ctggtcggtatcaacctgcttagggagggcctggatatgcccgaggtctccctggtgtgc
atcctagatgccgataaggaaggcttcctgcgctcggagcgctccctcattcagaccata
ggtcgcgccgcccgtaacgtgaacggcaaggtgatcctctacgccgataatataactaag
tcgatggccaaggcgatcggcgagactgagcgtcgcagggagaagcaacatgagtttaac
ctggccaacggtatcacaccgaagggggtgtcgaagaagatcgccgatgtgatggatctg
ggtgactataacgagcataccgccaaggtgttgccgaaatatcaaaaggtggccgagtcc
agaactacctatgccaagcaagacgcgtccagcctcagtcatcagatcgatgagctggag
aagcgtatgcaccagcatgccagagacctggagttcgagcaggctgccgcgctgcgtgac
gaggtgttggccctgcgcgaggcgctgattaaggcttag
DBGET
integrated database retrieval system
