Shewanella spartinae: K0I31_10880
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Entry
K0I31_10880 CDS
T09209
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
sspa
Shewanella spartinae
Pathway
sspa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0I31_10880 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspa03400
]
K0I31_10880 (ruvA)
DNA repair and recombination proteins [BR:
sspa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0I31_10880 (ruvA)
RecFOR pathway proteins
K0I31_10880 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
IMS_HHH
Transposase_20
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QYJ92159
LinkDB
All DBs
Position
complement(2435705..2436322)
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AA seq
205 aa
AA seq
DB search
MIGRLRGLLVEKQAPEVLIETGGVGYEVQMPLTSFYELPDLNQEAVIYTHFVVREDAQLL
YGFITKQERALFRLLIKTNGVGPKLALTILSGMTAGEFVKCVEHDDIATLVKLPGVGKKT
AERLLVEMRDKLKSLMEASHGNEREFVLQSNYTPAPVVNTAEEDAISALLALGYKPAQAS
KAVSSVFEEGMDSETLIKASLKSML
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgataggtcgtttacggggattactcgtcgagaagcaagcgcccgaggtgctgattgaa
actggcggtgtcggctatgaggtgcagatgccgctcaccagtttttatgaactgccagat
ttaaaccaagaggcggtgatctacacccacttcgtggtgcgtgaagatgcccagctgctg
tatggcttcatcaccaagcaggagagggcgctgttcaggctgctgatcaagaccaatggc
gtcggtcctaagctggcactgaccattctctctggcatgacggcgggcgaatttgtgaaa
tgcgtcgagcatgacgatatcgcaaccttggttaagctgccgggtgtcggcaagaagact
gccgagcgtttgctggttgagatgcgcgataagctcaagagcctgatggaagcctcccat
ggcaatgagcgcgagtttgtgttgcagtctaactatactcctgcacctgtggtcaacacc
gcggaagaagatgccatctcggcgcttttggcgttaggatataagccggcacaggccagt
aaggcggtgtccagtgtcttcgaagagggcatggattcagaaaccttgatcaaggcatcg
ctgaaatcgatgctctag
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