Shewanella spartinae: K0I31_11155
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Entry
K0I31_11155 CDS
T09209
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sspa
Shewanella spartinae
Pathway
sspa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K0I31_11155 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sspa03400
]
K0I31_11155 (recC)
Enzymes [BR:
sspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K0I31_11155 (recC)
DNA repair and recombination proteins [BR:
sspa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0I31_11155 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QYJ92206
LinkDB
All DBs
Position
2503245..2506859
Genome browser
AA seq
1204 aa
AA seq
DB search
MLYLVQSNRMEALAELLANELQTPLPGQSPLSNEQILVQSPGMSTWLRLAIAKQNQVAAA
LEFPLPSSFIWQLCHQLLPDVPKENAFTKPAMTWKLMELLPGLLSQEVFTPLANYLKDDA
ILTDSAAPHSLKLFQLCSQIADIFDQYLVYRPDWILAWEQGEDRLPPKERPLAANQQWQS
LLWRELIHYNHHTLNQSRYHRANLHQALFDALSDPQCDLSKLPPRLFVFGISSMAPQTLE
VLYFLAKRIDVVMLNLSPCQHYWGDIVDPKLRARMALQYGDKQQLAIDWESKLEVGNPLL
ANNGKMGRELLDLILELPENDTNFNFECYQDPGSNTLLHGVQQDILELCTRGETLGPDAE
LYLTTKGRRVLKIDDDSLTLRSCHSPLRELETLHDHLLEQLSQSDGLAPKDIVVMMPDVA
AYAPYIDAVFASKRGDHFIPYAIADRGAAQESPLINSFLHLLDLNKSRFALTDILGILEV
PAVMRRFDLDDDDLLLIRRWLEQAGVRWGRDEHSRQAQQLPAFEHNSWAFGIKRLILGYS
FSDEAPIYHDSLALPGVEGQSAQALGKLLNFIEAIDEFNLALGEHCPLSVRITQLQSLVE
TFYDCVDEELSQKQELLQAITRLDEELTATQYQSELELEVMQNWFTRHLTESRVGQRYLA
GSVNFCTLMPMRSIPFKLVCLLGMNDGVYPRVQHPVGFDLVAQEGPRKGDRSRRLDDRYL
FLEALLSAREQLYISYIGHSERDNSERIPSMLASELIEYCQLCYLPENCAHLLNGANADD
TSTADIAKIEQAILDQLIITMPLQPFDERLYLADESEGAESEGANSEPRRLRQSYSEQWC
PSALTEQDKQHDGEQGAKPASAGHFIEAPLNLVADEDKGEPLELSALIRFYRNPAQYFFN
RTLKLDLNLSIQADENDEPFALNPLSRYQLQSTLIEDAVKSGDERPSSELLERLRLSGQL
PLAPFDDLLLKQYQHDIRALVGRTLYLQGESSHTQDIDLLLSDSAATALVGRIDGVSAKG
LVNYRPGTANARDLIRVYLRHLCLNASLNTCLNASLKTSLSDNTNMESHEATPWQRHSYL
LDIGHFHAFAPITPEQALNQLSLWAEHYHQGQSQPLPFMPRTAFAYVEAEGDHIEKLIAA
QPQWLDEQSNLGEGQEAHYQRLFAFPDDFSETGFGTIASTLLSPMLSLYHKAPLSELADF
VEGQ
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgctgtatttggtgcaatcgaatcgaatggaagctttggcagagctgctcgccaacgag
ctacagacgcccctgccgggtcagtcgccgctgagcaatgagcagatcttggtccaaagc
cccggcatgtccacctggctcaggctcgccatcgccaagcaaaatcaggtcgcggcggcg
ctggagttccccctgccgtcgagttttatctggcaactctgccaccagctgctgccggat
gttcccaaggagaacgcctttaccaaaccggcgatgacctggaagctgatggagctgctg
ccaggcctcctgtctcaggaggtgtttaccccgctggcaaactatctgaaagacgatgcc
atactcacagacagcgcggcgccgcactcgttaaaactgtttcagctttgcagccagata
gccgacatcttcgaccaatatctggtctatcgccccgactggatcttggcttgggaacag
ggtgaggatcgactgccccccaaggagcgtccgctagcggccaaccagcagtggcaaagc
ctgctgtggcgcgaacttatccactacaatcatcatacgctgaaccagagccgctatcac
agggcgaacctgcaccaggcgctatttgatgccttaagcgatccccagtgcgatcttagc
aagttgccgccgcgcctgtttgtctttggtatctcctccatggcgccgcagaccctggaa
gtactctactttttggccaaacggatcgatgtggtgatgctcaacttaagcccctgccaa
cactattggggcgacatagtagatcctaagctcagggcgcgaatggcgctgcaatatggc
gacaagcagcaactcgccatcgattgggagagtaagctcgaggtgggtaatcccctgctg
gccaacaacggtaagatgggccgcgagctgttagaccttatcttggaactgccggaaaac
gataccaacttcaacttcgagtgctatcaagacccaggctcaaacaccctgctccacggc
gtgcagcaagatatcttggagctttgcacccggggcgaaaccctaggaccggacgccgaa
ctctatctcaccaccaaaggcagacgagtacttaagattgacgatgattccctgaccctc
agaagctgtcacagcccactgcgggagcttgagaccctgcacgatcatctgctggagcag
ttgtcgcaatcggatggtctcgcccccaaagatatcgtggtgatgatgccagatgtggcg
gcctacgcgccctacatagatgcggtatttgcctccaagcgcggtgatcattttatccct
tacgctatcgccgatcgcggcgcggcccaggaatcaccgctgatcaacagcttcctgcac
ctgctagatctcaacaagagccgcttcgccctgacggacatcttaggcatactcgaggtg
cccgccgtgatgcgccgattcgacctggacgatgatgatctcctgcttatccgccgctgg
ctggagcaggcgggcgtgcgctggggacgggatgagcacagccgtcaggcgcagcagctg
cctgccttcgaacacaactcctgggcctttggtatcaagcgattgatcttgggctatagc
ttcagcgatgaggcccccatctatcatgacagcctggccctccccggtgtcgaggggcag
tctgcccaggctctgggtaaactgcttaattttatcgaggcaatcgacgagtttaacctg
gcgcttggcgagcattgccccttaagcgtgcgcatcactcagttgcaatcactggtggag
accttctacgactgtgtcgatgaggagctgagtcagaaacaggagcttttacaggcaatc
acccgtctggatgaggagctcaccgccacacagtatcagagcgaactcgaacttgaggtg
atgcagaactggtttacccgtcacctcaccgagtcccgagtgggacagcgctacctggcc
ggtagcgtcaacttctgtaccctgatgccgatgcgctccatcccctttaagctggtctgt
ctgctgggcatgaacgatggcgtctaccccagggtacagcacccagtcggcttcgacctg
gtagcgcaagaagggccacgtaagggcgaccgttcccgcaggctggatgacagatacctg
ttcctcgaggcgctgctctctgccagagagcagctctacatcagctatatcggccatagc
gagcgggataacagtgagcgcatcccctctatgctggcgtccgagctcatcgaatactgt
cagctctgctatttgccggaaaattgtgcccacctgctgaacggggctaatgcagatgac
acaagcacagcagatattgcaaaaatcgagcaggccatcttagaccagctaatcatcacc
atgccgctacaacccttcgatgaacgcctctatctggcagacgagtctgaaggcgcagag
tctgaaggcgcaaatagtgagccaagacgtcttcgccagagctatagcgagcagtggtgc
cctagcgcccttactgagcaggataagcagcacgacggggagcagggtgccaagccagca
agtgctggtcatttcatcgaggcgccgctgaatctggtcgccgatgaagataagggcgag
ccgcttgagctctcggcgctgatccgtttctaccgcaatccggcgcagtatttcttcaat
cgcaccctcaagctggatcttaatctcagcatacaggcggatgaaaatgatgagcccttc
gccctcaatcccctgtctcgctatcagctgcaatcgaccctgatagaagatgcggtcaaa
tccggcgatgagcggccatcgagtgagttgctagagcgcttgcggctctcggggcagttg
ccccttgccccctttgatgatctcctgcttaaacagtatcagcacgatattcgcgccttg
gtcggtcgcaccctctatctacagggagagagcagccatacccaggatatcgacctgctg
ttgagcgatagcgccgctacggctctggttgggcgaatcgacggcgtcagcgccaagggg
ctggtcaactaccgtccgggaacggcaaacgcaagggatctgatccgcgtctatctgcgt
catctttgtcttaacgctagtcttaacacctgtcttaacgccagcctcaaaaccagtctt
agcgacaataccaacatggaaagccatgaagcaacgccctggcagcgccacagctatctg
ctcgatatcggccatttccacgccttcgcgccgataacgcccgagcaggcgctcaatcag
ctctcgctctgggccgagcattatcatcaggggcagagccagcccctgcccttcatgcca
agaaccgcctttgcctatgtcgaggccgagggtgatcatatagagaagctgatcgccgcc
cagccacaatggctggatgaacaatctaacctgggcgaaggacaggaggctcactatcag
cggctgtttgctttccccgatgactttagcgagacaggctttggcaccatcgccagcacg
ctgctctcacccatgctgagtctctatcacaaggcgccgctgagcgagttggccgatttc
gtggagggccaataa
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integrated database retrieval system
