Shewanella spartinae: K0I31_12455
Help
Entry
K0I31_12455 CDS
T09209
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspa02000
]
K0I31_12455
Transporters [BR:
sspa02000
]
Other transporters
Pores ion channels [TC:
1
]
K0I31_12455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QYJ92443
LinkDB
All DBs
Position
2824384..2827071
Genome browser
AA seq
895 aa
AA seq
DB search
MQPNSILAKAVRFALIGGAATAALSVPAVYSADEDSVERIQVTGSRIKRTDMETATPVTV
MSAEDMAKQGFTNVQDALESLTSTTSAMTTQSVHGFTPAASSISLRGAGANRTLTLINGK
RLNQYPKPSGGTDNFVDTANLPMEAVQRIEVLQSGGSAIYGADAVGGVINIILKKDFEGV
ALKYRHGDTTNGGGGSDRIALSLGASSDRGNVSTFIEFTDNEQLKATDRENFGLHTDKVP
YSEFSAYSSYGARIVGSGTGARQLTEEECTAGGYLWTGSLCGFDRSEWRDLQPKSSRFIS
STNFNYELADDISFVGRLDFAEAKSTTNIEPMAINDYDIKVAGNSVTVSNGDLSKTFNDK
TTALGGDFANATDGDYNYLRRLHEFSNRAGETKTRNYFFTAGLEGTLADEYSWDASVNYG
RTNVDVFRSGYATVGGMFDYITAGENGNSLLKNMSAEDVEQASYSPFEKAQSTQKNIQAN
ISGMAFEMPAGDAQFAFGAEYTEQDYETNTDSESKKGNILTTGGSSGAGERSFWATYAEL
SLPVLDVLTVDAALRYDRYDDFGGNLSPQLTIEYRPLSELLVRGSISSVFRAPDMHRVYG
DATKGFSTVIDFKQCQALGGIPGQGYPGDETLNAVCKELHVDTTTGANKDLEAETGYTAN
IGAVWGGDALNASFDLWEWKLDDMVSDISASKAAREYEQYESMLTRDASGTITHVNAVAQ
NLAFQKVRGLDITAGYSWDLDNIGELKLNFTGTYILLSEYQLSPTDPVEDDLENGGLPQY
RANVVLGYYIDDFEATLGAYHTARMHGVQYKTFKQSAIDNNEAFDESAHEVASQTKWNLT
AGYNITDAIKVKAGVVNLFDAGPNFDPTDTSWPHYPRSVYNARGREWFLEGEVKF
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctaattctatattggctaaagctgttcgtttcgcattaattggtggtgccgcg
acggcagcactaagcgtacctgccgtttattcggcggacgaagacagcgtagaacgtatt
caagtaacaggttcacgtattaagcgtaccgatatggaaacggctacacctgttaccgtc
atgagcgcagaagacatggcgaaacagggtttcactaacgttcaagatgcgttggaaagt
ctaacttcaaccaccagtgcaatgaccacccagtcagttcatggtttcacaccagccgcc
tcatctatcagtctacgtggcgccggtgctaaccgtactttgacactgatcaatggtaag
cgtctaaaccaatatccaaagccatctggtggtaccgataacttcgtagatactgctaac
ctgcctatggaagcggtacaacgtatcgaagtactgcaatctggtggttctgctatttac
ggtgctgacgccgttggtggtgtgatcaacatcatcctgaaaaaagacttcgaaggtgta
gcacttaagtaccgtcacggtgacaccacaaacggtggcggcggaagtgaccgtatcgcg
ctttctctaggtgcttcatctgatcgcggtaacgtatcgactttcatcgaatttaccgat
aacgagcagctaaaagcgactgatcgtgaaaacttcggtctacacactgacaaagtacca
tacagcgaattttctgcttacagctcatacggtgctcgcatcgtaggttctggtactggc
gcacgtcaactgactgaagaagaatgtaccgctggcggttacctgtggactggctctctg
tgtggtttcgaccgttcagaatggcgcgacctacaacctaagagctcacgtttcatcagc
tcaaccaacttcaactatgagctggccgatgacattagcttcgtaggtcgtttagatttc
gccgaagcgaaatctaccactaacatcgagcctatggcgatcaatgactacgacataaaa
gtcgcaggcaacagcgtcaccgtaagcaatggcgatctaagcaagactttcaacgacaag
actactgccctaggcggtgacttcgccaacgcaaccgatggtgattacaactacctacgt
cgtctacacgagttcagcaaccgtgctggcgagactaagacgcgtaactacttcttcacc
gctggtctggaaggcacactggctgatgaatacagctgggatgcatcagttaactacggc
cgtactaacgtagacgtgttccgcagtggctatgctactgttggcggcatgttcgactac
atcactgccggtgaaaacggcaactctctgctgaagaacatgagcgcagaagatgtagaa
caagcctcttactcaccatttgagaaggctcagtctactcagaagaacatccaggctaac
atctctggtatggcgttcgaaatgccagcgggtgacgctcagtttgcattcggtgctgag
tacacagagcaagactatgaaaccaacacagattcagagtctaagaaaggtaacatcctt
accactggtggttcttcaggtgccggtgagcgttctttctgggcaacttatgccgaattg
agcctacctgttcttgacgtactgactgtcgacgcggcactacgttatgaccgctacgat
gatttcggtggcaacctgtctccacagttgactattgaataccgtccactaagcgaacta
ttggttcgtggttctatcagctcagtattccgcgcaccagacatgcatcgtgtatatggt
gatgcgactaagggcttctctactgttatcgatttcaaacagtgtcaagcacttggtggt
attccaggtcagggctacccaggcgatgaaacactgaatgctgtttgtaaggaacttcac
gtagacactacaacaggtgctaacaaagatctggaagccgaaactggttacacagctaac
ataggcgcggtatggggcggtgatgcactcaacgcatcattcgacctatgggaatggaaa
ctggatgacatggttagcgacatcagcgctagcaaggctgctcgtgaatacgaacagtac
gaaagcatgctgactcgtgatgcaagcggcactatcactcacgtgaacgccgttgcacag
aacctggcattccaaaaagtacgtggtttagatatcactgctggttatagctgggatctg
gacaacattggtgagctgaagcttaacttcaccggtacttacatcctgttgtctgagtac
caactgtcaccaactgatccagttgaagacgatctagaaaacggtggtctgccacagtac
cgtgcaaacgttgtactgggttactacatcgatgacttcgaagcgaccttaggtgcttac
cacactgcgcgtatgcacggtgttcaatacaagacgttcaagcaatctgctatcgacaac
aacgaagcattcgacgaaagcgcacacgaagtggcatcacaaactaagtggaacctgact
gcaggttacaacatcactgatgctatcaaggtgaaagctggcgtagttaacctgttcgat
gcaggtcctaacttcgacccaaccgatacttcttggccgcactacccacgttctgtgtac
aacgcacgtggtcgtgagtggttcctagaaggtgaagtgaagttctaa
DBGET
integrated database retrieval system
