Shewanella spartinae: K0I31_15685
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Entry
K0I31_15685 CDS
T09209
Name
(GenBank) LysR family transcriptional regulator
KO
K18927
LysR family transcriptional regulator, L-lactate utilization regulator
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sspa03000
]
K0I31_15685
Transcription factors [BR:
sspa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
K0I31_15685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_20
HTH_45
HTH_8
Motif
Other DBs
NCBI-ProteinID:
QYJ93024
LinkDB
All DBs
Position
complement(3610884..3611777)
Genome browser
AA seq
297 aa
AA seq
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MARSVGTELELIHLFVHLVNTGGFSQVAKELGMPVATVSRKVTKLESLLDTQLIMRSTRK
LRLTEEGSELFGRYQNVVAQFDRCSEPRVEKAEGTLRIAAPVSIISMIFIGVLNDFSKAY
PDIQLHITQNNSSIDLIDEGVDVAIVGGAQPDSSWVSKSLGVLDYGLFASPGYLACAGTP
QHPDQLVEHSLIKVWPLFNWSMKHVSGEDFYYEGPAKLTLGDLNGAVRATVDDGGILYGP
ELFVKGELASGELRRVLPDWHGEQRRISLLYHQRTHQPLKVKLFIEFMQDRASCLFH
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtagcgtaggcacagaacttgagcttatccatctgtttgtgcatctggtgaat
accggcggtttttcccaggtggccaaagagctgggtatgcctgtggcgaccgttagccgc
aaggtgactaagctggaaagcctgcttgatactcagctgatcatgcgcagcacccgtaag
ctgaggttaaccgaggagggcagcgagctctttggccgctatcagaatgtggtggcccag
tttgaccgctgtagcgagcccagagtcgagaaggccgaaggtacactgcgcatcgcggcg
cccgtgtctatcatctcgatgatcttcatcggggtgctgaacgacttctccaaggcctat
ccggatattcagctgcatatcacccagaataactccagtatcgatctgatcgatgaaggg
gtggacgtggccatcgtcggcggcgcccagcccgactcttcctgggtctctaagtcgctg
ggggtcttggattatggcctatttgcctcgccgggctaccttgcctgcgccggtacgccg
caacatccggatcagttggtggagcactccttgatcaaggtgtggcctttgtttaactgg
tcgatgaagcatgtcagcggcgaagatttctattacgaaggcccggctaagttgaccctt
ggggatctcaacggtgcggtgcgcgccacggtagacgatggcggtattctctatggccca
gagctgttcgtgaagggggagcttgcctcgggtgagcttcgccgggtgttgcccgactgg
cacggcgagcagcgacgcatctccttgctgtaccatcagcgcacccatcagccgctcaag
gtgaagctgtttatcgaatttatgcaggacagagccagctgtttgttccattaa
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