Shewanella spartinae: K0I31_15855
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Entry
K0I31_15855 CDS
T09209
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sspa03009
]
K0I31_15855
Ribosome biogenesis [BR:
sspa03009
]
Prokaryotic type
ribosomal protein modification factors
K0I31_15855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
DUF1127
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
QYJ93055
LinkDB
All DBs
Position
complement(3645726..3647912)
Genome browser
AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
ARDISTDNIRLSQNNIVDPEDRYNQIFQIQVELPDDISDKDREGILRSIDRCTVKKVVQT
GPEFKIETVENLDADANAMLMGQPEGDSSTYILGKDLPLEQTIANMTEILAGLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGASKESALCSALGEFIERLNCNFFYNDQFFGLD
IANSEFVHYPNEKWFALTDDDSLPEGMLDDYSLEIYNPDGELCGSHLIDTNSGNIDRGIC
TIPYKRRSDGETVYFPSNLIENLFLSNGMSAGNNLQEAEVQCLSEIFERAVKRQIIEQEI
VLPDVPMAVLEKYPSILAGIKGLEEQGFPVVVRDASLGGQFPVMCVTLMNPKTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSNKADYEFCEWDFSGTNEEEAKGLFGILESLGKEVYVAEFEELGASACRILVPDYSEVY
PVDDLIWDNTNKALDYREDILNLHRLSDDELADLVNRLEESQLDNYTDIRTLIGIVFDEN
TVWGQLTIIELKILIYLALGAHEEALELVEDFLQFNDNTVQRGLFYQAMSAVLEVTLDEE
LELEHFIGNFTRMFGEEVMAQVVGSVNGEVRFSGLTETSMALEGIEPHLRLIESYKKLHQ
ARKIKAGL
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgataacctcagactcgaagccaaattcgacgatttt
accgtcaccgccgatcagcccatccgctacaagggtgacggctcggcgcctagccccttt
gattatttcctggcgtcgtcggccttgtgcgcggcctatttcgtaaaggtctactgtaag
gcgcgcgatatctcgaccgacaacattcgtctgtcacagaacaatatcgtcgacccggaa
gatcgctataaccagatcttccagatccaggtcgagctgccagacgatatctcggacaaa
gatcgcgaggggatcctgcgctccatcgaccgttgtaccgtgaaaaaggtggtccagact
ggcccagaatttaagattgagacggtagaaaacctggacgccgatgccaacgccatgttg
atgggccagcctgaaggcgacagcagcacctatattctgggtaaagatctgccgcttgag
cagactatcgccaacatgacggagatcctggctggactcgggatgaagatagagatctcc
tcctggcgcaacatagtgcccaacgtctggtcgctgcatattcgtgacgcggcctcgccc
atgtgcttcaccaatggtaagggcgcgagcaaggagagtgccctctgttcggccctgggc
gagtttatcgagcgtctgaactgtaacttcttctacaacgatcagttcttcggcctggat
atcgcaaacagcgagtttgtgcactaccccaacgagaagtggttcgccctcaccgatgac
gactcgctgcctgaaggcatgctggatgactacagcctggagatctataacccggatggc
gagctgtgcggctcgcatctgatcgataccaactcgggcaacatagatcgcggcatctgc
actattccttacaagcgccgctcggacggtgagacagtctatttcccatcgaacctgatt
gagaacctgttcttaagtaacggcatgagtgcgggcaacaacctgcaggaggctgaggtg
cagtgcctgtcggagatcttcgagcgcgcggtgaagcgtcagatcatcgagcaggagata
gtgctgccggacgtgcctatggccgtgctggagaagtaccctagtattcttgccggtatc
aagggactcgaggagcaaggcttccccgtggtggtgagagacgcttccctgggcggtcag
ttccccgtgatgtgtgtgaccctgatgaatcctaagactggcggcgtgttcgcttccttc
ggtgcgcacccaagcttcgaggtggcgctggagcgcagcctgaccgagcttttgcagggc
cgtagcttcgagggtcttaacgatgtgcctaagccgacctttaacagcatggcggtgagc
gagccggagaacttcgtcgagcactttatcgactcgaccggggtgatctcctggcgcttc
ttcagtaacaaggcggactatgagttctgcgagtgggacttctccggcaccaacgaggag
gaggccaaggggctgttcggcatcctggaaagcctaggcaaagaggtctatgtcgccgag
tttgaagaacttggcgcgtctgcctgccgcatcctggtgcctgattactctgaggtttat
ccggtggacgacctcatctgggacaacaccaacaaggcgctggactatcgtgaagatatc
cttaacctgcacagactgagcgatgatgagcttgccgatctggtcaatcgtctggaagag
agtcagctggataactacacggatatccgtaccctgatcggcatcgtcttcgacgaaaac
accgtctggggacagctgaccattatcgagctgaagatcctcatctatctggcgttgggc
gcacacgaagaggcgctggagctggtggaagacttcctgcagttcaacgacaacacggtg
cagcgtggcctcttctaccaggcgatgagcgcggtactcgaggtaactctggatgaagag
ctcgagcttgaacacttcatcggtaactttacccgcatgtttggtgaagaggtgatggct
caggtggtaggttcggtgaacggcgaggtgcgcttctcaggccttaccgagaccagcatg
gcgctggaagggatagagccgcacctgcgtcttatcgagagctacaagaagttgcatcag
gcccgtaaaattaaagccggcctttaa
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