Shewanella spartinae: K0I31_15900
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Entry
K0I31_15900 CDS
T09209
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
sspa
Shewanella spartinae
Pathway
sspa02010
ABC transporters
sspa02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
K0I31_15900
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K0I31_15900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sspa02000
]
K0I31_15900
Transporters [BR:
sspa02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
K0I31_15900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
PucR
Motif
Other DBs
NCBI-ProteinID:
QYJ93064
LinkDB
All DBs
Position
3657681..3658787
Genome browser
AA seq
368 aa
AA seq
DB search
MTMLIKTLVANTLATTNLVIRKWIREVIVTRLLITLISLTLLATTTLSADVSAKTLRFAV
VPKFYGAFFDQSKLGCEAAARQLKDVECIYLGPEISSVRLQDKVIEQLIDQGIDGIAVAI
TQSKFLAENSLTKAKAAGIPVITYDSDFDAPTLAEHQDLRRAYIGTDNFAFGLALGEQLK
KLRPNGGTLIIQTGRPDSPNLNLRIMGIRSALSGKTYESPPGKRLQNDNGWTEIREPFSN
FDQLSQAVKQMESVMKGKPIKADSFIAVGGWPQNDEALYRKMIAPYKIKLNNKEIIVIIS
DAAPPQLAMLQDRLAHTNIGQSPYEMGRQAIFTLHKIVSDQAFEQIVFTPIKLCTPENAE
TCTKSVSD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgactatgcttatcaagacgttagttgctaataccttagctacgactaacctagttatt
aggaaatggattcgagaggttatcgtgactcggttactcatcacactcatctcgctgacc
ttattggccaccactacgctcagcgcggatgtcagtgccaagacactgagattcgccgta
gtgccaaaattttacggcgctttcttcgatcagagtaagctcggctgcgaagccgccgca
aggcagctcaaggatgtcgagtgtatctatctggggccagagatctccagcgtgcgcctg
caagataaggtgatcgagcagcttatcgaccaaggcatagacggcattgccgtagccatc
acccagtctaagtttctcgctgaaaacagtctcaccaaggccaaggccgccggcatcccg
gtgatcacctatgactcagatttcgacgccccaaccctggccgaacatcaagatctacgc
cgcgcctacataggtaccgacaactttgcctttggcctggcactgggcgagcaactcaaa
aaactcaggcccaatggcggtaccctgatcatccaaactggccgccccgattctcccaac
ctcaacctgaggatcatgggcattcgcagtgcactatctggcaaaacctatgaaagccct
ccaggcaagcggctacaaaacgataacggctggacagagatcagggagcccttctctaac
ttcgatcagctcagtcaggcggtgaagcagatggagtctgtcatgaaaggtaaacccatc
aaggccgactcctttatcgcagtgggcggctggccgcaaaacgatgaggccctgtatcgc
aagatgatagcgccctataaaatcaagctaaataacaaagagataatcgtgattatctca
gatgcggcgccgcctcagctggccatgttgcaagaccgcctcgcccataccaacataggc
cagagcccctacgagatgggccgccaggcgatcttcacactgcacaaaattgtcagcgac
caggccttcgagcagatagtctttacccccatcaaactctgcacacccgaaaacgccgag
acctgcaccaagagcgtcagcgactga
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