Shewanella spartinae: K0I31_16060
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Entry
K0I31_16060 CDS
T09209
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sspa
Shewanella spartinae
Pathway
sspa00061
Fatty acid biosynthesis
sspa00071
Fatty acid degradation
sspa01100
Metabolic pathways
sspa01212
Fatty acid metabolism
sspa02024
Quorum sensing
sspa04146
Peroxisome
Module
sspa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
K0I31_16060
00071 Fatty acid degradation
K0I31_16060
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
K0I31_16060
09145 Cellular community - prokaryotes
02024 Quorum sensing
K0I31_16060
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sspa01004
]
K0I31_16060
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sspa04147
]
K0I31_16060
Enzymes [BR:
sspa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
K0I31_16060
Lipid biosynthesis proteins [BR:
sspa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
K0I31_16060
Exosome [BR:
sspa04147
]
Exosomal proteins
Exosomal proteins of breast milk
K0I31_16060
Exosomal proteins of breast cancer cells
K0I31_16060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QYJ93095
LinkDB
All DBs
Position
3697528..3699123
Genome browser
AA seq
531 aa
AA seq
DB search
MAYDSHAHVDLQKYASLIDLIETAAERYGDKTAYVCLGKANSFADIERDSRYFAAYLQQH
TRLEVGDKVAIQLPNITQFVIAAYGALRAGMILVNTNPLYTQRELIHQYRDSDAKALVVL
SDLLTTLEAVIPETQIETVISTHPLDLIAPQAEADSQLAHIGFNQVLALGSLVEYRPVEV
AQQSLAALQYTGGTTGLSKGAMLSHSNLLANMLQVQSRLASKFVEGEEIFIAPLPIYHIY
AFMVNFVYFEQGGCSVLIPNPRDISALIQTMSQHPFTGFAGLNTLFVGLCHQQSFQALDF
SHLKITISGGTALTQAAASIWQSTTGCTISEGYGLSETSPVVSLNAPGLECLGTIGRPVI
DTQVKILDANEQEVPQGEIGELAVKGPQVMSGYWQKPEETAKVMTNDGFFKTGDIALATE
DGMHKIVDRKKDMIIVSGFNVYPNEVEDVLAAHESVLECAVIGVDDSRSGEAVKAAIVLR
APELANDATKQALLEHCRAQLAAYKLPKIIEFMAALPKSTVGKILRRELRK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcctatgactcacatgcccatgtagatctgcaaaaatatgcatcactgatcgatctg
atcgaaacggccgccgagcgctatggcgacaagacagcctatgtgtgtctgggcaaggcc
aacagttttgccgatattgaacgcgactcccgctactttgccgcctacctacagcaacat
acccggcttgaggtgggcgataaggtcgccatccagctgcccaacatcacccagtttgtt
atcgccgcctatggcgcgctcagggccggcatgatactggtcaacactaaccccttgtat
acccagcgagaactgatccaccaatacagagactcggatgccaaggccttggtggtacta
agcgatctgctgacaaccctggaagctgtgatccccgagacccagatagagacggtaatt
tctacccacccgctggatctgatagccccccaagcagaggccgatagccagctcgcccac
ataggctttaaccaggtattggctctgggcagcctggtcgagtatcgcccggtagaggtc
gcgcagcagagcctggcggcgctgcaatacacgggcggcactacgggcctatccaagggc
gccatgctgagtcacagcaacctgctggccaatatgctgcaggtgcagtcgcgcctggcc
agtaaatttgtcgagggcgaggagatctttatcgcgcctctgcccatctaccatatctat
gccttcatggtgaacttcgtctacttcgagcagggcggatgcagcgtactcattcccaac
ccgagagatatcagcgcgctgattcagaccatgtcccagcatcccttcaccggctttgct
ggcctcaacaccctgtttgtcggtctgtgccatcagcagtcctttcaggcgctggacttt
agtcacctcaaaatcaccatctctggtggcacggcgctcactcaggcggcagccagcatc
tggcaatccaccacgggctgcaccatctcagaaggttatggcctgtcggaaacctcgccc
gtggtctcccttaacgcgccgggactcgagtgtcttggcaccataggtcgcccggtgatc
gatactcaggtgaagatcctcgacgccaacgagcaggaggtgccccagggtgagataggc
gagctggcggtcaagggcccccaggtgatgagcggctactggcagaagccagaggagacc
gccaaggtgatgaccaacgatggtttcttcaagaccggggatatcgccctggccacagaa
gatggcatgcacaagatagtggatcgcaagaaggatatgatcatcgtctccggcttcaac
gtctatcctaacgaggtggaagatgtgctggccgcccatgagagcgtgctggaatgcgcc
gtaattggcgtcgacgacagccgtagcggcgaggccgtcaaggccgccatagtgctgcga
gcacctgagctggcaaacgatgccactaagcaggccctgctcgaacattgccgcgctcag
ttagccgcctacaagctccccaagataatcgagttcatggccgcactgcccaagtcgacc
gtgggtaaaatcctgcgtcgagagttgaggaagtaa
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