Shewanella spartinae: K0I31_16850
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Entry
K0I31_16850 CDS
T09209
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
sspa
Shewanella spartinae
Brite
KEGG Orthology (KO) [BR:
sspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sspa03016
]
K0I31_16850 (tcdA)
Transfer RNA biogenesis [BR:
sspa03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
K0I31_16850 (tcdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
3HCDH_N
Pyr_redox_2
NAD_binding_7
Spermine_synth
DAO
UDPG_MGDP_dh_N
Sacchrp_dh_NADP
ApbA
ELFV_dehydrog
TrkA_N
Shikimate_DH
2-Hacid_dh_C
GLE1
Motif
Other DBs
NCBI-ProteinID:
QYJ93238
LinkDB
All DBs
Position
complement(3905011..3905823)
Genome browser
AA seq
270 aa
AA seq
DB search
MSQPELSDAYLNRFAGIGRLYGAKALTRFAQSHVAVVGIGGVGTWVAEALARSGIGEITL
IDLDDICVTNTNRQLHALKETIGESKVAVMAERIMQINPECRVNQVEDFITTDNLNDYFT
GRKQGGSLDYVVDCIDAVKPKAALIAHCKRQKLPIVTVGGAGGQTDPTQIQVADLAKTYQ
DPLLAKVRNLLRREYNFSKNVQRRFSIEAVFSTEQLVYPQADGSVCNVKATAEGSMRMDC
ASGFGAVTVVTGSFGFTAVSRVLTKLAAKA
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
ttgagccaacctgaactctctgacgcctatctcaatcgctttgccggcattggtcgccta
tatggcgccaaggcactgacccgatttgcgcagtcccatgtggctgtggtcggcataggc
ggggtaggtacctgggtagccgaggcactggcccgtagcggcataggcgagatcacccta
atcgatctcgacgatatctgtgtcaccaacaccaatcgccagctgcacgccctcaaggag
acgataggcgagtctaaggtggccgtgatggccgagcgtatcatgcagatcaaccccgag
tgccgggtcaatcaggtggaagatttcatcaccacagataacctgaatgactattttacc
ggtcgcaagcagggcggtagcttggactatgtggtcgactgtatcgatgcggtcaaacct
aaggcggcgctgatcgcccactgtaagcgccagaagctgccgatagtgacggtaggcggc
gccggcggccagacagatcccactcagatccaggtggcggatctcgccaagacttaccaa
gatcctctgctggccaaggtgcgtaacctgctgcgccgcgaatacaacttctctaagaat
gtgcagcgccgcttcagcatagaggcggtgttctccaccgagcagctggtctatccccag
gccgatggcagcgtctgcaacgtcaaggccacggccgagggcagcatgcgcatggactgt
gcttcgggcttcggcgctgtcacagtggtgacaggtagcttcggctttaccgccgtgagc
cgggtgctgaccaagcttgccgccaaggcatag
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